1PES | pdb_00001pes

NMR SOLUTION STRUCTURE OF THE TETRAMERIC MINIMUM TRANSFORMING DOMAIN OF P53

• PDB DOI: https://doi.org/10.2210/pdb1PES/pdb

• Classification: DNA-BINDING
• Organism(s): Homo sapiens
• Mutation(s): No 


• Deposited: 1994-11-24 Released: 1995-02-07 
• Deposition Author(s): Lee, W., Harvey, T.S., Yin, Y., Yau, P., Litchfield, D., Arrowsmith, C.H.

---

Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Submitted: 1 

Literature

Solution structure of the tetrameric minimum transforming domain of p53.

Lee, W., Harvey, T.S., Yin, Y., Yau, P., Litchfield, D., Arrowsmith, C.H.

(1994) Nat Struct Biol 1: 877-890

• PubMed: 7773777 
• DOI: https://doi.org/10.1038/nsb1294-877
• Primary Citation Related Structures: 
  1PES, 1PET


• PubMed Abstract: 
  

  We report the solution structure of the minimum transforming domain (residues 303-366) of human p53 (p53tet) determined by multidimensional NMR spectroscopy. This domain contains a number of important functions associated with p53 activity including transformation, oligomerization, nuclear localization and a phosphorylation site for p34/cdc2 kinase. p53tet forms a symmetric dimer of dimers that is significantly different from a recent structure reported for a shorter construct of this domain. Phosphorylation of Ser 315 has only minor structural consequences, as this region of the protein is unstructured. Modelling based on the p53tet structure suggests possible modes of interaction between adjacent domains in full-length p53 as well as modes of interaction with DNA.

---

Organizational Affiliation: 
• Division of Molecular and Structural Biology, Ontario Cancer Institute, Toronto, Canada.

Biological Assembly 1  

Global Symmetry: Dihedral - D2  (Explore in 3D)
Global Stoichiometry: Homo 4-mer - A4 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 15.06 kDa 
• Atom Count: 1,060 
• Modeled Residue Count: 124 
• Deposited Residue Count: 124 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
TUMOR SUPPRESSOR P53	A, B, C, D	31	Homo sapiens	Mutation(s): 0  Gene Names: HUMAN
UniProt & NIH Common Fund Data Resources
Find proteins for P04637 (Homo sapiens) Explore P04637  Go to UniProtKB:  P04637
PHAROS:  P04637 GTEx:  ENSG00000141510

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Submitted: 1 

Structure Validation

Entry History 

Deposition Data

• Released Date: 1995-02-07 
Deposition Author(s): Lee, W., Harvey, T.S., Yin, Y., Yau, P., Litchfield, D., Arrowsmith, C.H.

Revision History  

• Version 1.0: 1995-02-07
  Type: Initial release
  
• Version 1.1: 2008-03-24
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2022-02-23
  Changes: Database references, Derived calculations, Other
• Version 1.4: 2024-05-22
  Changes: Data collection