Biological Assembly 1  

 3D View: Structure | 1D-3D View | Validation Report | Ligand Interaction

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 10.13 kDa 
• Atom Count: 700 
• Modelled Residue Count: 93 
• Deposited Residue Count: 93 
• Unique protein chains: 1

1PCO

SOLUTION STRUCTURE OF PORCINE PANCREATIC PROCOLIPASE AS DETERMINED FROM 1H HOMONUCLEAR TWO-AND THREE-DIMENSIONAL NMR

• PDB DOI: 10.2210/pdb1PCO/pdb

• Classification: LIPASE PROTEIN COFACTOR
• Organism(s): Sus scrofa
• Mutation(s): No 


• Deposited: 1994-06-08 Released: 1994-12-20 
• Deposition Author(s): Breg, J.N., Sarda, L., Cozzone, P.J., Rugani, N., Boelens, R., Kaptein, R.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Submitted: 25 

Literature

Solution structure of porcine pancreatic procolipase as determined from 1H homonuclear two-dimensional and three-dimensional NMR.

Breg, J.N., Sarda, L., Cozzone, P.J., Rugani, N., Boelens, R., Kaptein, R.

(1995) Eur J Biochem 227: 663-672

• PubMed: 7867624 
• DOI: 10.1111/j.1432-1033.1995.tb20186.x
• Primary Citation of Related Structures:  
  1PCN, 1PCO


• PubMed Abstract: 
  

Procolipase is the precursor of colipase, which acts as protein cofactor for the activity of pancreatic lipase. The solution structure of procolipase has been determined by 1H NMR using two- and three-dimensional measurements. The secondary structure determination identified two separate three-stranded beta-sheet regions with concomitant hydrogen bond patterns. The tertiary structure of the protein was determined using 863 non-trivial proton--proton distance constraints, 14 hydrogen bond distance constraints and 55 phi and 25 X1 dihedral constraints. The structure that was obtained from distance geometry and energy refinement contains three highly disordered loops as well as a disordered N- and C-terminal region. The remaining part of the structure is well defined with a root-mean-square deviation (rmsd) relative to the average of 0.09 +/- 0.02 nm for backbone atoms (residues 11-30, 37-50, 57-69, 83-89). The protein comprises two identical domains, each containing a three-strand beta-sheet and two disulfide bonds: a 15-residue region in each domain superimposes with 0.07 nm rmsd, measured on backbone atoms. The solution structure is nearly identical to the crystal structure. It is in agreement with previous NMR data and, in combination with these data, supports the current model of procolipase micelle interaction and the lipase activation by colipase.

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Related Citations: 

• A Protein Fold Element Comprising a Triple-Strand B-Sheet and Two Disulphide Bridges Recognized in Procolipase and Other Unrelated Proteins
  Breg, J.N., Ujah, E.C., Sarda, L., Cozzone, P.J., Kaptein, R.
  () To be published --: --

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Organizational Affiliation: 

Department of NMR Spectroscopy, Bijvoet Centre for Biomolecular Research, Utrecht University, The Netherlands.

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
PORCINE PANCREATIC PROCOLIPASE B	A	93	Sus scrofa	Mutation(s): 0  Gene Names: CLPS
UniProt
Find proteins for P02703 (Sus scrofa) Explore P02703  Go to UniProtKB:  P02703

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
OH	B [auth A]	HYDROXIDE ION H O XLYOFNOQVPJJNP-UHFFFAOYSA-M

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Submitted: 25 
• OLDERADO: 1PCO Olderado

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 1994-06-08 
• Released Date: 1994-12-20 
Deposition Author(s): Breg, J.N., Sarda, L., Cozzone, P.J., Rugani, N., Boelens, R., Kaptein, R.

Revision History  

• Version 1.0: 1994-12-20
  Type: Initial release
  
• Version 1.1: 2008-03-24
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2017-11-29
  Changes: Derived calculations, Other