Download MendeleyStructure of YBEA from E. coli
BENACH, J., SHEN, J., ROST, B., XIAO, R., ACTON, T., MONTELIONE, G., HUNT, J.F.To be published.
1NS5
X-RAY STRUCTURE OF YBEA FROM E.COLI. NORTHEAST STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NESG) TARGET ER45
- PDB DOI: 10.2210/pdb1NS5/pdb
- Classification: Structural Genomics, Unknown Function
- Organism(s): Escherichia coli
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2003-01-27 Released: 2003-02-04
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.68 Å
- R-Value Free: 0.213
- R-Value Work: 0.145
- R-Value Observed: 0.145
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hypothetical protein ybeA | A, B | 155 | Escherichia coli | Mutation(s): 4 Gene Names: ybeA EC: 2.1.1.177 |  |
UniProt | |||||
Find proteins for P0A8I8 (Escherichia coli (strain K12)) Explore P0A8I8 Go to UniProtKB: P0A8I8 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A8I8 | ||||
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.68 Å
- R-Value Free: 0.213
- R-Value Work: 0.145
- R-Value Observed: 0.145
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 44.922 | α = 90 |
| b = 58.652 | β = 102.15 |
| c = 57.415 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| CBASS | data collection |
| SCALEPACK | data scaling |
| SOLVE | phasing |
| RESOLVE | phasing |
| REFMAC | refinement |
Entry History
Deposition Data
- Deposited Date: 2003-01-27
- Released Date: 2003-02-04 Deposition Author(s): Benach, J., Shen, J., Rost, B., Xiao, R., Acton, T., Montelione, G., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
Revision History (Full details and data files)
- Version 1.0: 2003-02-04
Type: Initial release - Version 1.1: 2008-04-29
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2019-07-24
Changes: Data collection, Derived calculations, Refinement description
