1NRU | pdb_00001nru

Gramicidin A in Dodecyl Phosphocholine Micelles in the Presence of Excess Na+ (NMR)

PDB DOI: https://doi.org/10.2210/pdb1NRU/pdb

Classification: ANTIBIOTIC
Organism(s): Brevibacillus brevis
Mutation(s): No

Deposited: 2003-01-25 Released: 2003-02-04
Deposition Author(s): Townsley, L.E., Hinton, J.F.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Submitted: 1

wwPDB Validation 3D Report Full Report

Validation slider image for 1NRU

This is version 2.1 of the entry. See complete history.

Literature

The Three-Dimensional Structure of Gramicidin Analogs in Micellar Environments Determined Using Two-Dimensional Nuclear Magnetic Resonance Spectroscopic Techniques

(2000) Phd Thesis

Macromolecule Content

Total Structure Weight: 3.76 kDa
Atom Count: 272
Modeled Residue Count: 32
Deposited Residue Count: 32
Unique protein chains: 1

Macromolecules

Find similar proteins by: Sequence | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
GRAMICIDIN A	A, B	16	Brevibacillus brevis	Mutation(s): 0

Small Molecules

Modified Residues 1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
DLE Query on DLE	A, B	D-PEPTIDE LINKING	C₆ H₁₃ N O₂		--
DVA Query on DVA	A, B	D-PEPTIDE LINKING	C₅ H₁₁ N O₂		--
FVA Query on FVA	A, B	L-PEPTIDE LINKING	C₆ H₁₁ N O₃		VAL

Biologically Interesting Molecules (External Reference)

1 Unique

Entity ID: 1
ID	Chains	Name	Type/Class	2D Diagram	3D Interactions
PRD_000150 Query on PRD_000150	A, B	GRAMICIDIN A	Polypeptide / Antibiotic		Interactions Focus chain A Focus chain B

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Submitted: 1

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2003-02-04

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2003-02-04
Type: Initial release
Version 1.1: 2011-06-14
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2011-07-27
Changes: Atomic model, Database references, Derived calculations, Non-polymer description, Structure summary
Version 1.4: 2012-12-12
Changes: Other
Version 2.0: 2023-11-15
Changes: Atomic model, Data collection, Database references, Derived calculations
Version 2.1: 2024-10-30
Changes: Structure summary

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.