1MEK

HUMAN PROTEIN DISULFIDE ISOMERASE, NMR, 40 STRUCTURES

• PDB DOI:  https://doi.org/10.2210/pdb1MEK/pdb

• Classification: ELECTRON TRANSPORT
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 1996-04-16 Released: 1997-04-21 
• Deposition Author(s): Kemmink, J., Darby, N.J., Dijkstra, K., Nilges, M., Creighton, T.E.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Submitted: 40 

Literature

Structure determination of the N-terminal thioredoxin-like domain of protein disulfide isomerase using multidimensional heteronuclear 13C/15N NMR spectroscopy.

Kemmink, J., Darby, N.J., Dijkstra, K., Nilges, M., Creighton, T.E.

(1996) Biochemistry 35: 7684-7691

• PubMed: 8672469 
• DOI: https://doi.org/10.1021/bi960335m
• Primary Citation of Related Structures:  
  1MEK


• PubMed Abstract: 
  

As a first step in dissecting the structure of human protein disulfide isomerase (PDI), the structure of a fragment corresponding to the first 120 residues of its sequence has been determined using heteronuclear multidimensional NMR techniques. As expected from its primary structure homology, the fragment has the thioredoxin fold. Similarities and differences in their structures help to explain why thioredoxins are reductants, whereas PDI is an oxidant of protein thiol groups. The results confirm that PDI has a modular, multidomain structure, which will facilitate its structural and functional characterization.

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Related Citations: 

• Nuclear Magnetic Resonance Characterization of the N-Terminal Thioredoxin-Like Domain of Protein Disulfide Isomerase
  Kemmink, J., Darby, N.J., Dijkstra, K., Scheek, R.M., Creighton, T.E.
  (1995) Protein Sci 4: 2587

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Organizational Affiliation: 

European Molecular Biology Laboratory, Heidelberg, Germany.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 13.28 kDa 
• Atom Count: 937 
• Modelled Residue Count: 120 
• Deposited Residue Count: 120 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
PROTEIN DISULFIDE ISOMERASE	A	120	Homo sapiens	Mutation(s): 0  Gene Names: P4HB, ERBA2L, PDI, PDIA1, PO4DB EC: 5.3.4.1
UniProt & NIH Common Fund Data Resources
Find proteins for P07237 (Homo sapiens) Explore P07237  Go to UniProtKB:  P07237
PHAROS:  P07237

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Submitted: 40 

Structure Validation

Entry History 

Deposition Data

• Released Date: 1997-04-21 
Deposition Author(s): Kemmink, J., Darby, N.J., Dijkstra, K., Nilges, M., Creighton, T.E.

Revision History  

• Version 1.0: 1997-04-21
  Type: Initial release
  
• Version 1.1: 2008-03-24
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2022-02-23
  Changes: Database references, Derived calculations, Other