1JZT

Crystal structure of yeast ynu0, YNL200c


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.94 Å
  • R-Value Free: 0.237 
  • R-Value Work: 0.200 
  • R-Value Observed: 0.200 

wwPDB Validation   3D Report Full Report


This is version 1.4 of the entry. See complete history


Literature

Crystal Structure of Yeast Hypothetical Protein YNU0_YEAST

Jiang, J.-S.Manning, N.O.Eswaramoorthy, S.Gerchman, S.E.Kumaran, D.Kycia, J.H.Lewis, H.A.Swaminathan, S.Studier, F.W.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Hypothetical 27.5 kDa protein in SPX19-GCR2 intergenic region AB246Saccharomyces cerevisiaeMutation(s): 4 
Gene Names: YNL200C
EC: 5.1.99.6
Find proteins for P40165 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Explore P40165 
Go to UniProtKB:  P40165
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CL
Query on CL

Download Ideal Coordinates CCD File 
A, B
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A,BL-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.94 Å
  • R-Value Free: 0.237 
  • R-Value Work: 0.200 
  • R-Value Observed: 0.200 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 57.732α = 90
b = 68.676β = 90
c = 125.187γ = 90
Software Package:
Software NamePurpose
ARP/wARPmodel building
SOLVEphasing
CNSrefinement
CCP4model building
DENZOdata reduction
SCALEPACKdata scaling
CNSphasing
CCP4phasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2001-09-26
    Type: Initial release
  • Version 1.1: 2008-04-27
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Derived calculations, Version format compliance
  • Version 1.3: 2014-11-26
    Changes: Other
  • Version 1.4: 2021-02-03
    Changes: Advisory, Database references, Derived calculations, Structure summary