1J5Y

Crystal structure of transcriptional regulator (TM1602) from Thermotoga maritima at 2.3 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.30 Å
  • R-Value Free: 0.234 
  • R-Value Work: 0.190 
  • R-Value Observed: 0.190 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Crystal structure of a transcription regulator (TM1602) from Thermotoga maritima at 2.3 A resolution.

Weekes, D.Miller, M.D.Krishna, S.S.McMullan, D.McPhillips, T.M.Acosta, C.Canaves, J.M.Elsliger, M.A.Floyd, R.Grzechnik, S.K.Jaroszewski, L.Klock, H.E.Koesema, E.Kovarik, J.S.Kreusch, A.Morse, A.T.Quijano, K.Spraggon, G.van den Bedem, H.Wolf, G.Hodgson, K.O.Wooley, J.Deacon, A.M.Godzik, A.Lesley, S.A.Wilson, I.A.

(2007) Proteins 67: 247-252


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
TRANSCRIPTIONAL REGULATOR, BIOTIN REPRESSOR FAMILYA187Thermotoga maritimaMutation(s): 6 
Gene Names: TM1602
Find proteins for Q9X1T8 (Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099))
Explore Q9X1T8 
Go to UniProtKB:  Q9X1T8
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NI
Query on NI

Download CCD File 
A
NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
 Ligand Interaction
K
Query on K

Download CCD File 
A
POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
AL-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 90.9566α = 90
b = 90.9566β = 90
c = 90.9566γ = 90
Software Package:
Software NamePurpose
MOSFLMdata reduction
SCALAdata scaling
CCP4data reduction
SOLVEphasing
RESOLVEmodel building
CNSrefinement
CCP4data scaling
RESOLVEphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2002-07-31
    Type: Initial release
  • Version 1.1: 2008-04-26
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Derived calculations, Version format compliance
  • Version 1.3: 2018-07-18
    Changes: Advisory, Data collection, Database references