1I31

MU2 ADAPTIN SUBUNIT (AP50) OF AP2 CLATHRIN ADAPTOR, COMPLEXED WITH EGFR INTERNALIZATION PEPTIDE FYRALM AT 2.5 A RESOLUTION

• PDB DOI: https://doi.org/10.2210/pdb1I31/pdb

• Classification: ENDOCYTOSIS/EXOCYTOSIS
• Organism(s): Rattus norvegicus
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2001-02-12 Released: 2001-02-21 
• Deposition Author(s): Modis, Y., Boll, W., Rapoport, I., Kirchhausen, T.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.50 Å
• R-Value Free: 0.255 
• R-Value Work: 0.247 

Starting Model: experimental

Literature

MU2 ADAPTIN SUBUNIT (AP50) OF AP2 CLATHRIN ADAPTOR, COMPLEXED WITH EGFR INTERNALIZATION PEPTIDE FYRALM AT 2.5 A RESOLUTION

Modis, Y., Boll, W., Rapoport, I., Kirchhausen, T.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 2-mer - A1B1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 36.55 kDa 
• Atom Count: 2,169 
• Modelled Residue Count: 262 
• Deposited Residue Count: 320 
• Unique protein chains: 2

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
CLATHRIN COAT ASSEMBLY PROTEIN AP50	A	314	Rattus norvegicus	Mutation(s): 0  Gene Names: AP50
UniProt
Find proteins for P84092 (Rattus norvegicus) Explore P84092  Go to UniProtKB:  P84092

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
EPIDERMAL GROWTH FACTOR RECEPTOR	B [auth P]	6	N/A	Mutation(s): 0  EC: 2.7.10.1
UniProt
Find proteins for A8IP97 (Rattus norvegicus) Explore A8IP97  Go to UniProtKB:  A8IP97

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.50 Å
• R-Value Free: 0.255 
• R-Value Work: 0.247 
• Space Group: P 6₄

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 125.727	α = 90
b = 125.727	β = 90
c = 74.634	γ = 120

Software Package:

Software Name	Purpose
DENZO	data reduction
SCALEPACK	data scaling
AMoRE	phasing
REFMAC	refinement

Structure Validation

Entry History 

Deposition Data

• Released Date: 2001-02-21 
Deposition Author(s): Modis, Y., Boll, W., Rapoport, I., Kirchhausen, T.

Revision History  

• Version 1.0: 2001-02-21
  Type: Initial release
  
• Version 1.1: 2008-04-27
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2023-08-09
  Changes: Data collection, Database references, Refinement description