1I2L

DEOXYCHORISMATE LYASE FROM ESCHERICHIA COLI WITH INHIBITOR


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.30 Å
  • R-Value Free: 0.275 
  • R-Value Work: 0.183 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.3 of the entry. See complete history


Literature

Structure and Mechanism of Escherichia coli Aminodeoxychorismate Lyase

Jensen, P.Y.Parsons, J.F.Fisher, K.E.Pachikara, A.S.Tordova, M.Howard, A.J.Eisenstein, E.Ladner, J.E.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
4-AMINO-4-DEOXYCHORISMATE LYASEA269Escherichia coliMutation(s): 0 
Gene Names: pabC
EC: 4 (PDB Primary Data), 4.1.3.38 (UniProt)
UniProt
Find proteins for P28305 (Escherichia coli (strain K12))
Explore P28305 
Go to UniProtKB:  P28305
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP28305
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
DCS
Query on DCS

Download Ideal Coordinates CCD File 
B [auth A]D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE
C11 H16 N3 O7 P
NNRZSZJOQKAGTO-SECBINFHSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.30 Å
  • R-Value Free: 0.275 
  • R-Value Work: 0.183 
  • Space Group: P 21 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 39.494α = 90
b = 72.06β = 90
c = 81.662γ = 90
Software Package:
Software NamePurpose
X-GENdata scaling
X-GENdata reduction
CNSrefinement
CNSphasing

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2003-09-02
    Type: Initial release
  • Version 1.1: 2008-04-27
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Derived calculations, Version format compliance
  • Version 1.3: 2017-10-04
    Changes: Refinement description