1HDS

MACROMOLECULAR STRUCTURE REFINEMENT BY RESTRAINED LEAST-SQUARES AND INTERACTIVE GRAPHICS AS APPLIED TO SICKLING DEER TYPE III HEMOGLOBIN

• PDB DOI: https://doi.org/10.2210/pdb1HDS/pdb

• Classification: OXYGEN TRANSPORT
• Organism(s): Odocoileus virginianus
• Mutation(s): No 


• Deposited: 1979-10-01 Released: 1979-12-07 
• Deposition Author(s): Amma, E.L., Girling, R.L.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.98 Å

Literature

Macromolecular Structure Refinement by Restrained Least-Squares and Interactive Graphics as Applied to Sickling Deer Type III Hemoglobin

Girling, R.L., Houston, T.E., Schmidtjunior, W.C., Amma, E.L.

(1980) Acta Crystallogr A 36: 43

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Hetero 4-mer - A2B2 Pseudo Symmetry: Dihedral - D2  (Explore in 3D)
Pseudo Stoichiometry: Homo 4-mer - A4 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 64.46 kDa 
• Atom Count: 4,556 
• Modelled Residue Count: 572 
• Deposited Residue Count: 572 
• Unique protein chains: 2

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
HEMOGLOBIN S (DEOXY) (ALPHA CHAIN)	A, C	141	Odocoileus virginianus	Mutation(s): 0
UniProt
Find proteins for P01972 (Odocoileus virginianus virginianus) Explore P01972  Go to UniProtKB:  P01972

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
HEMOGLOBIN S (DEOXY) (BETA CHAIN)	B, D	145	Odocoileus virginianus	Mutation(s): 0
UniProt
Find proteins for P02074 (Odocoileus virginianus virginianus) Explore P02074  Go to UniProtKB:  P02074

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
HEM	E [auth A], F [auth B], G [auth C], H [auth D]	PROTOPORPHYRIN IX CONTAINING FE C34 H32 Fe N4 O4 KABFMIBPWCXCRK-RGGAHWMASA-L

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.98 Å
• Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 163.5	α = 90
b = 70.83	β = 94.15
c = 65.95	γ = 90

Structure Validation

Entry History 

Deposition Data

• Released Date: 1979-12-07 
Deposition Author(s): Amma, E.L., Girling, R.L.

Revision History  

• Version 1.0: 1979-12-07
  Type: Initial release
  
• Version 1.1: 2008-03-03
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2020-06-24
  Changes: Data collection, Database references, Other
• Version 1.4: 2024-02-07
  Changes: Data collection, Database references, Derived calculations