1HAB

CROSSLINKED HAEMOGLOBIN


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.30 Å
  • R-Value Work: 0.191 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Allosteric intermediates indicate R2 is the liganded hemoglobin end state.

Schumacher, M.A.Zheleznova, E.E.Poundstone, K.S.Kluger, R.Jones, R.T.Brennan, R.G.

(1997) Proc Natl Acad Sci U S A 94: 7841-7844

  • DOI: 10.1073/pnas.94.15.7841
  • Structures With Same Primary Citation

  • PubMed Abstract: 
  • Hemoglobin has been a long-standing paradigm for understanding protein allostery. Here, the x-ray structures of two chemically crosslinked, fully liganded hemoglobins, alpha2beta82CA82beta and alpha2beta82ND82beta, are described at 2.3 A and 2.6 A re ...

    Hemoglobin has been a long-standing paradigm for understanding protein allostery. Here, the x-ray structures of two chemically crosslinked, fully liganded hemoglobins, alpha2beta82CA82beta and alpha2beta82ND82beta, are described at 2.3 A and 2.6 A resolution, respectively. Strikingly, these crosslinked hemoglobins assume intermediate conformations that lie between those of R and the controversial liganded hemoglobin state R2 rather than between R and T. Thus, these structures support only a T left and right arrow R left and right arrow R2 allosteric pathway and underscore the physiological importance of the R2 conformation.


    Related Citations: 
    • Allosteric Transition Intermediates Modelled by Crosslinked Haemoglobins
      Schumacher, M.A., Dixon, M.M., Kluger, R., Jones, R.T., Brennan, R.G.
      (1995) Nature 375: 84

    Organizational Affiliation

    Department of Biochemistry and Molecular Biology, Oregon Health Sciences University, 3181 SW Sam Jackson Park Road, Portland, OR 97201-3098, USA.



Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
HEMOGLOBIN A
A, C
141Homo sapiensMutation(s): 0 
Gene Names: HBA1HBA2
Find proteins for P69905 (Homo sapiens)
Go to UniProtKB:  P69905
NIH Common Fund Data Resources
PHAROS  P69905

Find similar proteins by: Sequence  |  Structure

Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
HEMOGLOBIN A
B, D
146Homo sapiensMutation(s): 0 
Gene Names: HBB
Find proteins for P68871 (Homo sapiens)
Go to UniProtKB:  P68871
NIH Common Fund Data Resources
PHAROS  P68871
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
HEM
Query on HEM

Download CCD File 
A, B, C, D
PROTOPORPHYRIN IX CONTAINING FE
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
 Ligand Interaction
CIN
Query on CIN

Download CCD File 
D
4-CARBOXYCINNAMIC ACID
C10 H8 O4
HAEJSGLKJYIYTB-ZZXKWVIFSA-N
 Ligand Interaction
CMO
Query on CMO

Download CCD File 
A, B, C, D
CARBON MONOXIDE
C O
UGFAIRIUMAVXCW-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.30 Å
  • R-Value Work: 0.191 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 86.84α = 90
b = 87.11β = 90
c = 97.63γ = 90
Software Package:
Software NamePurpose
TNTrefinement
ADSCdata collection

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1997-11-12
    Type: Initial release
  • Version 1.1: 2008-03-03
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance