1EWR | pdb_00001ewr

CRYSTAL STRUCTURE OF TAQ MUTS


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.19 Å
  • R-Value Free: 
    0.361 (Depositor), 0.359 (DCC) 
  • R-Value Work: 
    0.331 (Depositor), 0.332 (DCC) 
  • R-Value Observed: 
    0.331 (Depositor) 

wwPDB Validation 3D Report Full Report

Validation slider image for 1EWR

This is version 1.4 of the entry. See complete history

Literature

Crystal structures of mismatch repair protein MutS and its complex with a substrate DNA.

Obmolova, G.Ban, C.Hsieh, P.Yang, W.

(2000) Nature 407: 703-710

  • DOI: https://doi.org/10.1038/35037509
  • Primary Citation Related Structures: 
    1EWQ, 1EWR

  • PubMed Abstract: 

    DNA mismatch repair is critical for increasing replication fidelity in organisms ranging from bacteria to humans. MutS protein, a member of the ABC ATPase superfamily, recognizes mispaired and unpaired bases in duplex DNA and initiates mismatch repair. Mutations in human MutS genes cause a predisposition to hereditary nonpolyposis colorectal cancer as well as sporadic tumours. Here we report the crystal structures of a MutS protein and a complex of MutS with a heteroduplex DNA containing an unpaired base. The structures reveal the general architecture of members of the MutS family, an induced-fit mechanism of recognition between four domains of a MutS dimer and a heteroduplex kinked at the mismatch, a composite ATPase active site composed of residues from both MutS subunits, and a transmitter region connecting the mismatch-binding and ATPase domains. The crystal structures also provide a molecular framework for understanding hereditary nonpolyposis colorectal cancer mutations and for postulating testable roles of MutS.


  • Organizational Affiliation
    • Genetics and Biochemistry Branch, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland 20892, USA.

Macromolecule Content 

  • Total Structure Weight: 146.1 kDa 
  • Atom Count: 7,593 
  • Modeled Residue Count: 976 
  • Deposited Residue Count: 1,298 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
DNA MISMATCH REPAIR PROTEIN MUTS
A, B
649Thermus aquaticusMutation(s): 7 
UniProt
Find proteins for Q56215 (Thermus aquaticus)
Explore Q56215 
Go to UniProtKB:  Q56215
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ56215
Sequence Annotations
Expand
Reference Sequence

Small Molecules

Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.19 Å
  • R-Value Free:  0.361 (Depositor), 0.359 (DCC) 
  • R-Value Work:  0.331 (Depositor), 0.332 (DCC) 
  • R-Value Observed: 0.331 (Depositor) 
Space Group: P 31 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 96.734α = 90
b = 96.734β = 90
c = 427.126γ = 120
Software Package:
Software NamePurpose
CNSrefinement
DENZOdata reduction
SCALEPACKdata scaling
CNSphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2000-10-23
    Type: Initial release
  • Version 1.1: 2008-04-27
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2018-06-27
    Changes: Data collection, Database references
  • Version 1.4: 2024-10-30
    Changes: Data collection, Database references, Derived calculations, Structure summary