1ESK | pdb_00001esk

SOLUTION STRUCTURE OF NCP7 FROM HIV-1

PDB DOI: https://doi.org/10.2210/pdb1ESK/pdb

Classification: VIRAL PROTEIN
Organism(s): Human immunodeficiency virus type 1 group M subtype B (isolate HXB2)
Mutation(s): No

Deposited: 2000-04-10 Released: 2000-04-26
Deposition Author(s): Morellet, N., Demene, H., Teilleux, V., Huynh-Dinh, T., de Rocquigny, H., Fournie-Zaluski, M.-C., Roques, B.P.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 50
Conformers Submitted: 9
Selection Criteria: structures with acceptable covalent geometry,structures with favorable non-bond energy,structures with the least restraint violations,structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 1ESK

This is version 1.4 of the entry. See complete history.

Literature

Solution Structure of (12-53)NCp7 of HIV-1

Morellet, N., Demene, H., Teilleux, V., Huynh-Dinh, T., de Rocquigny, H., Fournie-Zaluski, M.-C., Roques, B.P.

To be published.

Macromolecule Content

Total Structure Weight: 4.97 kDa
Atom Count: 334
Modeled Residue Count: 42
Deposited Residue Count: 42
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
GAG POLYPROTEIN	A	42	N/A	Mutation(s): 0
UniProt
Find proteins for P04585 (Human immunodeficiency virus type 1 group M subtype B (isolate HXB2)) Explore P04585 Go to UniProtKB: P04585
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P04585
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ZN Query on ZN Download:Ideal Coordinates CCD File SDF format, chain C [auth A] SDF format, chain B [auth A] MOL2 format, chain C [auth A] MOL2 format, chain B [auth A] mmCIF format, chain C [auth A] mmCIF format, chain B [auth A]	B [auth A], C [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain B [auth A] Focus chain C [auth A]

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 50
Conformers Submitted: 9
Selection Criteria: structures with acceptable covalent geometry,structures with favorable non-bond energy,structures with the least restraint violations,structures with the lowest energy

Structure Validation

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Entry History

Deposition Data

Released Date: 2000-04-26

Deposition Author(s):

de Rocquigny, H.

Fournie-Zaluski, M.-C.

Revision History (Full details and data files)

Version 1.0: 2000-04-26
Type: Initial release
Version 1.1: 2008-04-27
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2022-02-16
Changes: Data collection, Database references, Derived calculations
Version 1.4: 2024-05-22
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.