1E8R

SOLUTION STRUCTURE OF TYPE X CBD


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 50 
  • Conformers Submitted: 
  • Selection Criteria: 5 STRUCTURES CHOSEN AT RANDOM FROM THE 21 LOWEST ENERGY STRUCTURES 

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This is version 1.2 of the entry. See complete history


Literature

Solution Structure of the Cbm10 Cellulose Binding Module from Pseudomonas Xylanase A

Raghothama, S.Simpson, P.J.Szabo, L.Nagy, T.Gilbert, H.J.Williamson, M.P.

(2000) Biochemistry 39: 978

  • DOI: https://doi.org/10.1021/bi992163+
  • Primary Citation of Related Structures:  
    1E8R, 1QLD

  • PubMed Abstract: 

    Plant cell wall hydrolases generally have a modular structure consisting of a catalytic domain linked to one or more noncatalytic carbohydrate-binding modules (CBMs), whose common function is to attach the enzyme to the polymeric substrate. Xylanase A from Pseudomonas fluorescens subsp. cellulosa (Pf Xyn10A) consists of a family 10 catalytic domain, an N-terminal family IIa cellulose-binding module, and an internal family 10 cellulose-binding module. The structure of the 45-residue family 10 CBM has been determined in solution using NMR. It consists of two antiparallel beta-sheets, one with two strands and one with three, with a short alpha-helix across one face of the three-stranded sheet. There is a high density of aromatic residues on one side of the protein, including three aromatic residues (Tyr8, Trp22, and Trp24), which are exposed and form a flat surface on one face, in a classical polysaccharide-binding arrangement. The fold is closely similar to that of the oligonucleotide/oligosaccharide-binding (OB) fold, but appears to have arisen by convergent evolution, because there is no sequence similarity, and the presumed binding sites are on different faces.


  • Organizational Affiliation

    Department of Molecular Biology and Biotechnology, Krebs Institute, University of Sheffield, Sheffield S10 2TN, U.K.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
ENDO-1,4-BETA-XYLANASE50Pseudomonas fluorescensMutation(s): 0 
EC: 3.2.1.8
UniProt
Find proteins for P14768 (Cellvibrio japonicus (strain Ueda107))
Explore P14768 
Go to UniProtKB:  P14768
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP14768
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 50 
  • Conformers Submitted: 
  • Selection Criteria: 5 STRUCTURES CHOSEN AT RANDOM FROM THE 21 LOWEST ENERGY STRUCTURES 

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2000-10-03
    Type: Initial release
  • Version 1.1: 2011-05-08
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance