1D5V

SOLUTION STRUCTURE OF THE FORKHEAD DOMAIN OF THE ADIPOCYTE-TRANSCRIPTION FACTOR FREAC-11 (S12)

• PDB DOI: https://doi.org/10.2210/pdb1D5V/pdb

• Classification: GENE REGULATION
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 1999-10-12 Released: 2000-10-11 
• Deposition Author(s): van Dongen, M.J.P., Cederberg, A., Carlsson, P., Enerback, S., Wikstrom, M.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 125 
• Conformers Submitted: 25 
• Selection Criteria: structures with the lowest energy 

Literature

Solution structure and dynamics of the DNA-binding domain of the adipocyte-transcription factor FREAC-11.

van Dongen, M.J., Cederberg, A., Carlsson, P., Enerback, S., Wikstrom, M.

(2000) J Mol Biology 296: 351-359

• PubMed: 10669593 
• DOI: https://doi.org/10.1006/jmbi.1999.3476
• Primary Citation of Related Structures:  
  1D5V


• PubMed Abstract: 
  

  Transcription factors of the forkhead type share a highly conserved DNA-binding domain of about 100 amino acid residues. FREAC-11, expressed in adipocytes, belongs to this class. Here, we report on NMR studies that established the three-dimensional structure of the FREAC-11, DNA-binding domain. Although apparent similarities to the structures of other members within the forkhead family are observed, the structure also reveals some remarkable differences. Along with the complementary dynamics, the data provide insight into the fundamentals of sequence specificity within a highly conserved motif.

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Organizational Affiliation: 

Department of Structural Chemistry, Pharmacia and Upjohn, Nordenflychtsvägen 62:5, Stockholm, S-11287, Sweden. [e-mail]

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 11.08 kDa 
• Atom Count: 780 
• Modelled Residue Count: 94 
• Deposited Residue Count: 94 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
S12 TRANSCRIPTION FACTOR (FKH-14)	A	94	Homo sapiens	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for Q99958 (Homo sapiens) Explore Q99958  Go to UniProtKB:  Q99958
PHAROS:  Q99958 GTEx:  ENSG00000176692

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 125 
• Conformers Submitted: 25 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2000-10-11 
Deposition Author(s): van Dongen, M.J.P., Cederberg, A., Carlsson, P., Enerback, S., Wikstrom, M.

Revision History  

• Version 1.0: 2000-10-11
  Type: Initial release
  
• Version 1.1: 2008-04-27
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2022-02-16
  Changes: Data collection, Database references, Derived calculations
• Version 1.4: 2024-05-22
  Changes: Data collection