1BIV

BOVINE IMMUNODEFICIENCY VIRUS TAT-TAR COMPLEX, NMR, 5 STRUCTURES


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 
  • Conformers Submitted: 
  • Selection Criteria: structures with acceptable covalent geometry and least restraint violations 

wwPDB Validation 3D Report Full Report


This is version 1.4 of the entry. See complete history

Literature

Molecular recognition in the bovine immunodeficiency virus Tat peptide-TAR RNA complex.

Ye, X.Kumar, R.A.Patel, D.J.

(1995) Chem.Biol. 2: 827-840


  • PubMed Abstract: 
  • In lentiviruses such as human immunodeficiency virus (HIV) and bovine immunodeficiency virus (BIV), the Tat (trans-activating) protein enhances transcription of the viral RNA by complexing to the 5'-end of the transcribed mRNA, at a region known as T ...

    In lentiviruses such as human immunodeficiency virus (HIV) and bovine immunodeficiency virus (BIV), the Tat (trans-activating) protein enhances transcription of the viral RNA by complexing to the 5'-end of the transcribed mRNA, at a region known as TAR (the trans-activation response element). Identification of the determinants that account for specific molecular recognition requires a high resolution structure of the Tat peptide-TAR RNA complex.


    Organizational Affiliation

    Cellular Biochemistry & Biophysics Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10021, USA.




Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
TAT PEPTIDE
B
17Bovine immunodeficiency virus (strain R29)Mutation(s): 0 
Gene Names: tat
Find proteins for P19564 (Bovine immunodeficiency virus (strain R29))
Go to UniProtKB:  P19564
Entity ID: 1
MoleculeChainsLengthOrganism
TAR RNAA28synthetic construct
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 
  • Conformers Submitted: 
  • Selection Criteria: structures with acceptable covalent geometry and least restraint violations 
  • Olderado: 1BIV Olderado
Software Package:
Software NamePurpose
X-PLORphasing
X-PLORrefinement
X-PLORmodel building

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1996-12-23
    Type: Initial release
  • Version 1.1: 2008-03-24
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance
  • Version 1.3: 2016-05-25
    Type: Structure summary
  • Version 1.4: 2019-08-21
    Type: Data collection, Experimental preparation, Other, Refinement description, Source and taxonomy, Structure summary