1ASJ

P1/MAHONEY POLIOVIRUS, AT CRYOGENIC TEMPERATURE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Work: 0.253 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Structural studies of poliovirus mutants that overcome receptor defects.

Wien, M.W.Curry, S.Filman, D.J.Hogle, J.M.

(1997) Nat.Struct.Mol.Biol. 4: 666-674

  • Primary Citation of Related Structures:  

  • PubMed Abstract: 
  • In order to better understand the process of cell entry for non-enveloped viruses, we have solved the crystal structures of five poliovirus mutants which can infect cells expressing mutant poliovirus receptors. Four of these structures have been solv ...

    In order to better understand the process of cell entry for non-enveloped viruses, we have solved the crystal structures of five poliovirus mutants which can infect cells expressing mutant poliovirus receptors. Four of these structures have been solved from frozen crystals using cryocrystallographic data collection methods. The mutations have a range of structural consequences, from small local perturbations to significant loop rearrangements. All of the mutant viruses are more labile to conversion to an apparent cell entry intermediate, suggesting that these mutant viruses could compensate for the suboptimal receptors by lowering the thermal energy required to undergo the receptor-mediated conformational change.


    Related Citations: 
    • Three-Dimensional Structure of Poliovirus at 2.9 A Resolution
      Hogle, J.M.,Chow, M.,Filman, D.J.
      (1985) Science 229: 1358
    • A Pseudo-Cell Based Approach to Efficient Crystallographic Refinement of Viruses
      Jacobson, D.H.,Hogle, J.M.,Filman, D.J.
      (1996) Acta Crystallogr.,Sect.D 52: 693


    Organizational Affiliation

    Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, Massachusetts 02138, USA.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
P1/MAHONEY POLIOVIRUS
0
5N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
P1/MAHONEY POLIOVIRUS
1
302Poliovirus type 1 (strain Mahoney)Mutation(s): 0 
Find proteins for P03300 (Poliovirus type 1 (strain Mahoney))
Go to UniProtKB:  P03300
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
P1/MAHONEY POLIOVIRUS
2
272Poliovirus type 1 (strain Mahoney)Mutation(s): 0 
Find proteins for P03300 (Poliovirus type 1 (strain Mahoney))
Go to UniProtKB:  P03300
Entity ID: 4
MoleculeChainsSequence LengthOrganismDetails
P1/MAHONEY POLIOVIRUS
3
238Poliovirus type 1 (strain Mahoney)Mutation(s): 0 
Find proteins for P03300 (Poliovirus type 1 (strain Mahoney))
Go to UniProtKB:  P03300
Entity ID: 5
MoleculeChainsSequence LengthOrganismDetails
P1/MAHONEY POLIOVIRUS
4
68Poliovirus type 1 (strain Mahoney)Mutation(s): 0 
Find proteins for P03300 (Poliovirus type 1 (strain Mahoney))
Go to UniProtKB:  P03300
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MYR
Query on MYR

Download SDF File 
Download CCD File 
4
MYRISTIC ACID
C14 H28 O2
TUNFSRHWOTWDNC-UHFFFAOYSA-N
 Ligand Interaction
SPH
Query on SPH

Download SDF File 
Download CCD File 
1
SPHINGOSINE
C18 H37 N O2
WWUZIQQURGPMPG-MSOLQXFVSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Work: 0.253 
  • Space Group: P 21 21 2
Unit Cell:
Length (Å)Angle (°)
a = 320.150α = 90.00
b = 355.550β = 90.00
c = 377.800γ = 90.00
Software Package:
Software NamePurpose
X-PLORmodel building
DENZOdata reduction
SCALEPACKdata scaling
X-PLORphasing
X-PLORrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1997-12-03
    Type: Initial release
  • Version 1.1: 2008-03-24
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Source and taxonomy, Version format compliance
  • Version 1.3: 2017-11-29
    Type: Derived calculations, Other