Biological Assembly 1  

 3D View: Structure

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Global Symmetry: Cyclic - C3  (3D View)
Global Stoichiometry: Homo 3-mer - A3 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 16179.76 
• Atom Count: 1125 
• Residue Count: 141 
• Unique protein chains: 1

1AQ5

HIGH-RESOLUTION SOLUTION NMR STRUCTURE OF THE TRIMERIC COILED-COIL DOMAIN OF CHICKEN CARTILAGE MATRIX PROTEIN, 20 STRUCTURES

• DOI: 10.2210/pdb1AQ5/pdb
• BMRB: 4054

• Classification: COILED-COIL
• Organism(s): Gallus gallus
• Expression System: Escherichia coli BL21(DE3)


• Deposited: 1997-08-07 Released: 1998-02-11 
• Deposition Author(s): Dames, S.A., Wiltscheck, R., Kammerer, R.A., Engel, J., Alexandrescu, A.T.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 30 
• Conformers Submitted: 20 
• Selection Criteria: LOWEST ENERGY AND LEAST RESTRAINT VIOLATIONS 

Literature

NMR structure of a parallel homotrimeric coiled coil.

Dames, S.A., Kammerer, R.A., Wiltscheck, R., Engel, J., Alexandrescu, A.T.

(1998) Nat.Struct.Mol.Biol. 5: 687-691

• PubMed: 9699631 
• DOI: 10.1038/1382


• PubMed Abstract: 
  

The solution structure of the oligomerization domain of cartilage matrix protein (also known as matrilin-1) has been determined by heteronuclear NMR spectroscopy. The domain folds into a parallel, disulfide-linked, three-stranded, alpha-helical coiled coil, spanning five heptad repeats in the amino acid sequence. The sequence of the first two heptad repeats shows some deviations from the consensus of hydrophobic and hydrophilic residue preferences. While the corresponding region of the coiled coil has a higher intrinsic flexibility, backbone alpha-helix and superhelix parameters are consistent with a regular coiled coil structure.

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Related Citations: 

• Heteronuclear NMR assignments and secondary structure of the coiled coil trimerization domain from cartilage matrix protein in oxidized and reduced forms.
  Wiltscheck, R.,Kammerer, R.A.,Dames, S.A.,Schulthess, T.,Blommers, M.J.,Engel, J.,Alexandrescu, A.T.
  (1997) Protein Sci. 6: 1734




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Organizational Affiliation: 

Department of Structural Biology, Biozentrum, University of Basel, Switzerland.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
CARTILAGE MATRIX PROTEIN	A, B, C	47	Gallus gallus	Mutation(s): 0  Gene Names: MATN1 (CMP)
Find proteins for P05099 (Gallus gallus) Go to Gene View: MATN1 Go to UniProtKB:  P05099

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 30 
• Conformers Submitted: 20 
• Selection Criteria: LOWEST ENERGY AND LEAST RESTRAINT VIOLATIONS 
• Olderado: 1AQ5 Olderado

Software Package:

Software Name	Purpose
X-PLOR	phasing
X-PLOR	model building
X-PLOR	refinement

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 1997-08-07 
• Released Date: 1998-02-11 
• Deposition Author(s): Dames, S.A., Wiltscheck, R., Kammerer, R.A., Engel, J., Alexandrescu, A.T.

Revision History 

• Version 1.0: 1998-02-11
  Type: Initial release
• Version 1.1: 2008-03-24
  Type: Version format compliance
• Version 1.2: 2011-07-13
  Type: Version format compliance