1AE5

HUMAN HEPARIN BINDING PROTEIN


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.30 Å

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Structure of HBP, a multifunctional protein with a serine proteinase fold.

Iversen, L.F.Kastrup, J.S.Bjorn, S.E.Rasmussen, P.B.Wiberg, F.C.Flodgaard, H.J.Larsen, I.K.

(1997) Nat Struct Biol 4: 265-268

  • DOI: 10.1038/nsb0497-265
  • Primary Citation of Related Structures:  
    1AE5

  • PubMed Abstract: 
  • The structure of human heparin binding protein reveals that the serine proteinase fold has been used as a scaffold for a multifunctional protein with antibacterial activity, monocyte and t-cell activating properties and endotoxin and heparin binding ...

    The structure of human heparin binding protein reveals that the serine proteinase fold has been used as a scaffold for a multifunctional protein with antibacterial activity, monocyte and t-cell activating properties and endotoxin and heparin binding capacity.


    Related Citations: 
    • Crystallization and Molecular Replacement Solution of Human Heparin Binding Protein
      Iversen, L.F., Kastrup, J.S., Larsen, I.K., Bjorn, S.E., Rasmussen, P.B., Wiberg, F.C., Flodgaard, H.J.
      (1996) Acta Crystallogr D Biol Crystallogr 52: 1222
    • Characterization of Recombinant Human Hbp/CAP37/Azurocidin, a Pleiotropic Mediator of Inflammation-Enhancing Lps-Induced Cytokine Release from Monocytes
      Rasmussen, P.B., Bjorn, S., Hastrup, S., Nielsen, P.F., Norris, K., Thim, L., Wiberg, F.C., Flodgaard, H.
      (1996) FEBS Lett 390: 109

    Organizational Affiliation

    Department of Life Science, Faculty of Bioscience and Biotechnology, Tokyo Institute of Technology, Yokohama, Japan.



Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
HEPARIN BINDING PROTEINA225Homo sapiensMutation(s): 0 
Gene Names: AZU1
Find proteins for P20160 (Homo sapiens)
Explore P20160 
Go to UniProtKB:  P20160
NIH Common Fund Data Resources
PHAROS  P20160
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NAG
Query on NAG

Download CCD File 
A
2-acetamido-2-deoxy-beta-D-glucopyranose
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.30 Å
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 39.19α = 90
b = 66.12β = 90
c = 101.36γ = 90
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
AMoREphasing
TNTrefinement

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1998-03-11
    Type: Initial release
  • Version 1.1: 2008-03-24
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Non-polymer description, Version format compliance
  • Version 1.3: 2020-07-29
    Type: Remediation
    Reason: Carbohydrate remediation
    Changes: Data collection, Derived calculations, Structure summary