6M79

Cryo-EM structure of Arabidopsis CRY under blue light-mediated activation


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Structural insights into the photoactivation of Arabidopsis CRY2.

Ma, L.Guan, Z.Wang, Q.Yan, X.Wang, J.Wang, Z.Cao, J.Zhang, D.Gong, X.Yin, P.

(2020) Nat Plants 6: 1432-1438

  • DOI: https://doi.org/10.1038/s41477-020-00800-1
  • Primary Citation of Related Structures:  
    6M79

  • PubMed Abstract: 

    The blue-light receptor cryptochrome (CRY) in plants undergoes oligomerization to transduce blue-light signals after irradiation, but the corresponding molecular mechanism remains poorly understood. Here, we report the cryogenic electron microscopy structure of a blue-light-activated CRY2 tetramer at a resolution of 3.1 Å, which shows how the CRY2 tetramer assembles. Our study provides insights into blue-light-mediated activation of CRY2 and a theoretical basis for developing regulators of CRYs for optogenetic manipulation.


  • Organizational Affiliation

    National Key Laboratory of Crop Genetic Improvement and National Centre of Plant Gene Research, Huazhong Agricultural University, Wuhan, China.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Cryptochrome-2
A, B, C, D
612Arabidopsis thalianaMutation(s): 0 
Gene Names: CRY2PHH1SEL20At1g04400F19P19.14
UniProt
Find proteins for Q96524 (Arabidopsis thaliana)
Explore Q96524 
Go to UniProtKB:  Q96524
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ96524
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONRELION3.0-beta-2
MODEL REFINEMENTPHENIX1.16

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2020-10-14
    Type: Initial release
  • Version 1.1: 2021-08-04
    Changes: Database references