3B9C

Crystal Structure of Human GRP CRD

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.90 Å
  • R-Value Free: 0.266 
  • R-Value Work: 0.221 
  • R-Value Observed: 0.224 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history. 


Literature

Crystal structure of the C-terminal conserved domain of human GRP, a galectin-related protein, reveals a function mode different from those of galectins.

Zhou, D., Ge, H., Sun, J., Gao, Y., Teng, M., Niu, L.

(2008) Proteins 71: 1582-1588

  • DOI: https://doi.org/10.1002/prot.22003
  • Primary Citation of Related Structures:  
    3B9C
    • Organizational Affiliation: 

    Hefei National Laboratory for Physical Sciences at Microscale and School of Life Sciences, University of Science and Technology of China, Hefei, Anhui 230027, China.


Macromolecules
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(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
HSPC159A,
B [auth D],
C,
D [auth B]		144Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for Q3ZCW2 (Homo sapiens)
Explore Q3ZCW2 
Go to UniProtKB:  Q3ZCW2
PHAROS:  Q3ZCW2
GTEx:  ENSG00000119862 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ3ZCW2
Sequence Annotations
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  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4
Download Ideal Coordinates CCD File 
E [auth A]
F [auth A]
H [auth D]
I [auth D]
L [auth C]
E [auth A],
F [auth A],
H [auth D],
I [auth D],
L [auth C],
O [auth B],
P [auth B]
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
BME
Query on BME
Download Ideal Coordinates CCD File 
G [auth A]
J [auth D]
K [auth D]
M [auth C]
N [auth C]
G [auth A],
J [auth D],
K [auth D],
M [auth C],
N [auth C],
Q [auth B]
BETA-MERCAPTOETHANOL
C2 H6 O S
DGVVWUTYPXICAM-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.90 Å
  • R-Value Free: 0.266 
  • R-Value Work: 0.221 
  • R-Value Observed: 0.224 
  • Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 123.14α = 90
b = 96.67β = 118.79
c = 61.57γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
MAR345dtbdata collection
AUTOMARdata reduction
PHASERphasing

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2008-03-18
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2023-11-01
    Changes: Data collection, Database references, Derived calculations, Refinement description