9KU8 | pdb_00009ku8

Solution NMR structure of P1 peptide bound with E. coli LPS

PDB DOI: https://doi.org/10.2210/pdb9KU8/pdb

Classification: ANTIMICROBIAL PROTEIN
Organism(s): synthetic construct
Mutation(s): No

Deposited: 2024-12-03 Released: 2026-05-27
Deposition Author(s): Mohid, S.A., Bhunia, A.
Funding Organization(s): Department of Biotechnology (DBT, India), Council of Scientific & Industrial Research (CSIR)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 9KU8

This is version 1.0 of the entry. See complete history.

Literature

Bacterial entrapment and sensitization by rationally designed amy-loidogenic peptides

Mohid, S.A., Bhunia, A.

To be published.

Macromolecule Content

Total Structure Weight: 2.46 kDa
Atom Count: 171
Modeled Residue Count: 23
Deposited Residue Count: 23
Unique protein chains: 1

Macromolecules

Find similar proteins by: Sequence | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
LYS-PRO-VAL-ALA-LYS-PRO-LYS-ILE-MET-ALA-THR-ASN-GLY-VAL-VAL-HIS-VAL-ILE-THR-ASN-VAL-LEU-GLN	A	23	synthetic construct	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

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View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2026-05-27

Deposition Author(s):

Funding Organization	Location	Grant Number
Department of Biotechnology (DBT, India)	India	BT/PR29978/MED/30/2037/2018
Department of Biotechnology (DBT, India)	India	BT/PR40174/BTIS/137/45/2022
Council of Scientific & Industrial Research (CSIR)	India	02(0292)/17/EMR-II

Revision History (Full details and data files)

Version 1.0: 2026-05-27
Type: Initial release

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.