7PMP | pdb_00007pmp

Solution structure of Legionella pneumophila LspD

PDB DOI: https://doi.org/10.2210/pdb7PMP/pdb
BMRB: 34663

Classification: PROTEIN TRANSPORT
Organism(s): Legionella pneumophila
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2021-09-02 Released: 2022-09-14
Deposition Author(s): Portlock, T.J., Garnett, J.A.
Funding Organization(s): Engineering and Physical Sciences Research Council

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 20
Conformers Submitted: 20
Selection Criteria: all calculated structures submitted

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Solution structure of Legionella pneumophila LspD N0

Portlock, T.J., Garnett, J.A.

To be published.

Macromolecule Content

Total Structure Weight: 12.3 kDa
Atom Count: 864
Modeled Residue Count: 111
Deposited Residue Count: 111
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Type II protein secretion LspD	A	111	Legionella pneumophila	Mutation(s): 0 Gene Names: lspD
UniProt
Find proteins for Q5ZVW8 (Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)) Explore Q5ZVW8 Go to UniProtKB: Q5ZVW8
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q5ZVW8
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 20
Conformers Submitted: 20
Selection Criteria: all calculated structures submitted

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2022-09-14

Deposition Author(s):

Funding Organization	Location	Grant Number
Engineering and Physical Sciences Research Council	United Kingdom	1806169

Revision History (Full details and data files)

Version 1.0: 2022-09-14
Type: Initial release
Version 1.1: 2024-06-19
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.