7ACB

Covalent/noncovalent tetramer of Capra hircus Cathelicidin-1 in DPC (dodecylphosphocholine) micelles

PDB DOI: https://doi.org/10.2210/pdb7ACB/pdb
BMRB: 34558

Classification: ANTIMICROBIAL PROTEIN
Organism(s): Capra hircus
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2020-09-10 Released: 2021-09-15
Deposition Author(s): Myshkin, M.Y., Mironov, P., Shenkarev, Z.O.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Dodecapeptide Cathelicidins of Cetartiodactyla: Structure, Mechanism of Antimicrobial Action, and Synergistic Interaction With Other Cathelicidins

Bolosov, I.A., Panteleev, P.V., Sychev, S.V., Sukhanov, S.V., Mironov, P.A., Myshkin, M.Y., Shenkarev, Z.O., Ovchinnikova, T.V.

(2021) Front Microbiol 12: 2249

DOI: https://doi.org/10.3389/fmicb.2021.725526

Macromolecule Content

Total Structure Weight: 6.04 kDa
Atom Count: 412
Modelled Residue Count: 48
Deposited Residue Count: 48
Unique protein chains: 1

Macromolecules

Find similar proteins by: Sequence | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Capra hircus Cathelicidin-1 (dodecylphosphocholine)	A, B, C, D	12	Capra hircus	Mutation(s): 0
UniProt
Find proteins for W5VVI0 (Capra hircus) Explore W5VVI0 Go to UniProtKB: W5VVI0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	W5VVI0
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2021-09-15

Deposition Author(s):

Shenkarev, Z.O.

Revision History (Full details and data files)

Version 1.0: 2021-09-15
Type: Initial release
Version 1.1: 2023-06-14
Changes: Other

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.