4X3C
TORPEDO CALIFORNICA ACETYLCHOLINESTERASE IN COMPLEX WITH A TACRINE-NICOTINAMIDE HYBRID INHIBITOR
- PDB DOI: https://doi.org/10.2210/pdb4X3C/pdb
- Classification: HYDROLASE
- Organism(s): Tetronarce californica
- Mutation(s): No 
- Deposited: 2014-11-28 Released: 2015-12-23 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.60 Å
- R-Value Free: 0.280 
- R-Value Work: 0.219 
- R-Value Observed: 0.222 
This is version 3.1 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Acetylcholinesterase | 534 | Tetronarce californica | Mutation(s): 0  EC: 3.1.1.7 | ||
UniProt | |||||
Find proteins for P04058 (Tetronarce californica) Explore P04058  Go to UniProtKB:  P04058 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P04058 | ||||
Sequence AnnotationsExpand | |||||
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Oligosaccharides
Small Molecules
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
TNH Query on TNH | D [auth A] | N-[6-(1,2,3,4-tetrahydroacridin-9-ylamino)hexyl]pyridine-3-carboxamide C25 H30 N4 O QMTDQDYAGOQABA-UHFFFAOYSA-N | |||
NAG Query on NAG | C [auth A] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.60 Å
- R-Value Free: 0.280 
- R-Value Work: 0.219 
- R-Value Observed: 0.222 
- Space Group: P 31 2 1
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 112.02 | α = 90 |
b = 112.02 | β = 90 |
c = 136.47 | γ = 120 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
MOSFLM | data reduction |
SCALA | data scaling |
PHASER | phasing |
Entry History 
Deposition Data
- Released Date: 2015-12-23  Deposition Author(s): Pesaresi, A., Lamba, D.
Revision History (Full details and data files)
- Version 1.0: 2015-12-23
Type: Initial release - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Atomic model, Data collection, Derived calculations, Structure summary - Version 3.0: 2021-05-12
Changes: Advisory, Atomic model, Data collection, Derived calculations, Structure summary - Version 3.1: 2024-01-10
Changes: Data collection, Database references, Refinement description