3HJ2

Crystal structure of covalent dimer of HNP1

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.40 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.199 
  • R-Value Observed: 0.201 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history. 


Literature

What Dictates the Multifaced Functions of the Human alpha-Defensin HNP1?

Wei, G., de Leeuw, E., Pazgier, M., Rajabi, M., Li, J., Zou, G., Ericksen, B., Wu, Z., Yuan, W., Szmacinski, H., Lu, W.-Y., Lubkowski, J., Lehrer, R.L., Lu, W.

To be published.

Macromolecules
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(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
HUMAN NEUTROPHIL PEPTIDE 1
A, B
33Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P59665 (Homo sapiens)
Explore P59665 
Go to UniProtKB:  P59665
PHAROS:  P59665
GTEx:  ENSG00000240247 ENSG00000206047 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP59665
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.40 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.199 
  • R-Value Observed: 0.201 
  • Space Group: P 21 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 47.07α = 90
b = 49.37β = 90
c = 24.99γ = 90
Software Package:
Software NamePurpose
HKL-2000data collection
PHASERphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

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View more in-depth experimental data
Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2009-10-20
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2018-01-24
    Changes: Database references
  • Version 1.3: 2023-09-06
    Changes: Data collection, Database references, Refinement description