1Z3R

Solution structure of the Omsk Hemhorraghic Fever Envelope Protein Domain III

• PDB DOI: https://doi.org/10.2210/pdb1Z3R/pdb

• Classification: VIRAL PROTEIN
• Organism(s): Omsk hemorrhagic fever virus
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2005-03-14 Released: 2006-03-14 
• Deposition Author(s): Volk, D.E., Chavez, L., Beasley, D.W., Barrett, A.D., Gorenstein, D.G.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 50 
• Conformers Submitted: 15 
• Selection Criteria: structures with the least restraint violations 

Literature

Structure of the envelope protein domain III of Omsk hemorrhagic fever virus.

Volk, D.E., Chavez, L., Beasley, D.W., Barrett, A.D., Holbrook, M.R., Gorenstein, D.G.

(2006) Virology 351: 188-195

• PubMed: 16647096 
• DOI: https://doi.org/10.1016/j.virol.2006.03.030
• Primary Citation of Related Structures:  
  1Z3R


• PubMed Abstract: 
  

  We have solved the NMR solution structure of domain III from the Omsk hemorrhagic fever virus envelope protein and report the first sequencing of the Guriev strain of this virus. Important structural differences between tick-borne flaviviruses, such as OHFV and TBE, and mosquito-borne flaviviruses, such as West Nile virus, are discussed.

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Organizational Affiliation: 

Department of Biochemistry and Molecular Biology, University of Texas Medical Branch, Galveston, TX 77555-1157, USA.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 10.85 kDa 
• Atom Count: 759 
• Modelled Residue Count: 99 
• Deposited Residue Count: 99 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
polyprotein	A	99	Omsk hemorrhagic fever virus	Mutation(s): 0
UniProt
Find proteins for Q80J37 (Omsk hemorrhagic fever virus) Explore Q80J37  Go to UniProtKB:  Q80J37

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 50 
• Conformers Submitted: 15 
• Selection Criteria: structures with the least restraint violations 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2006-03-14 
Deposition Author(s): Volk, D.E., Chavez, L., Beasley, D.W., Barrett, A.D., Gorenstein, D.G.

Revision History  

• Version 1.0: 2006-03-14
  Type: Initial release
  
• Version 1.1: 2008-04-30
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2022-03-02
  Changes: Data collection, Database references, Derived calculations