PRD_900104

thio-xylopentaose

Created:2020-05-08
Last modified:  2020-07-29

PRD_900104 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 3CUJ.

Chemical Details

Formal Charge0
Atom Count88
Chiral Atom Count20
Bond Count92
Aromatic Bond Count0
Toggle HydrogenToggle Labels

Chemical Component Summary

Namethio-xylopentaose
Systematic Name (OpenEye OEToolkits)(2S,3R,4S,5R)-2-[(3R,4R,5R,6S)-6-[(3R,4R,5R,6S)-6-[(3R,4R,5R,6S)-4,5-dihydroxy-6-[(3R,4R,5R,6R)-4,5,6-trihydroxyoxan-3- yl]sulfanyl-oxan-3-yl]sulfanyl-4,5-dihydroxy-oxan-3-yl]sulfanyl-4,5-dihydroxy-oxan-3-yl]sulfanyloxane-3,4,5-triol
FormulaC25 H42 O17 S4
Molecular Weight742.851
TypeSACCHARIDE

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESACDLabs10.04S(C2COC(SC1C(O)C(O)C(O)OC1)C(O)C2O)C5OCC(SC4OCC(SC3OCC(O)C(O)C3O)C(O)C4O)C(O)C5O
SMILESCACTVS3.341O[CH]1CO[CH](S[CH]2CO[CH](S[CH]3CO[CH](S[CH]4CO[CH](S[CH]5CO[CH](O)[CH](O)[CH]5O)[CH](O)[CH]4O)[CH](O)[CH]3O)[CH](O)[CH ]2O)[CH](O)[CH]1O
SMILESOpenEye OEToolkits1.5.0C1C(C(C(C(O1)SC2COC(C(C2O)O)SC3COC(C(C3O)O)SC4COC(C(C4O)O)SC5COC(C(C5O)O)O)O)O)O
Canonical SMILESCACTVS3.341 O[C@@H]1CO[C@@H](S[C@@H]2CO[C@@H](S[C@@H]3CO[C@@H](S[C@@H]4CO[C@@H](S[C@@H]5CO[C@@H](O)[C@H](O)[C@H]5O)[C@H](O)[C@H]4O) [C@H](O)[C@H]3O)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O
Canonical SMILESOpenEye OEToolkits1.5.0 C1[C@H]([C@@H]([C@H]([C@@H](O1)S[C@@H]2CO[C@H]([C@@H]([C@H]2O)O)S[C@@H]3CO[C@H]([C@@H]([C@H]3O)O)S[C@@H]4CO[C@H]([C@@H] ([C@H]4O)O)S[C@@H]5CO[C@H]([C@@H]([C@H]5O)O)O)O)O)O
InChIInChI1.03 InChI=1S/C25H42O17S4/c26-6-1-39-22(17(33)11(6)27)44-8-3-41-24(19(35)13(8)29)46-10-5-42-25(20(36)15(10)31)45-9-4-40-23(1 8(34)14(9)30)43-7-2-38-21(37)16(32)12(7)28/h6-37H,1-5H2/t6-,7-,8-,9-,10-,11+,12+,13+,14+,15+,16-,17-,18-,19-,20-,21-,22+ ,23+,24+,25+/m1/s1
InChIKeyInChI1.03 AFEUKIGCSANJHD-KUFDKHFESA-N

Related Resource References

Resource NameReference
PubChem 25227366