PRD_900071

Heparan sulfate disaccharide

Created:2020-05-08
Last modified:  2020-07-29

PRD_900071 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 5OCA.

Chemical Details

Formal Charge0
Atom Count65
Chiral Atom Count10
Bond Count66
Aromatic Bond Count0
Toggle HydrogenToggle Labels

Chemical Component Summary

NameHeparan sulfate disaccharide
Systematic Name (OpenEye OEToolkits)[(2~{R},3~{S},4~{R},5~{R},6~{R})-2-[[(2~{S},3~{S},4~{R},5~{S},6~{R})-3,6-bis(oxidanyl)-4,5-disulfooxy-oxan-2-yl]methoxy ]-6-(hydroxymethyl)-3,5-disulfooxy-oxan-4-yl] hydrogen sulfate
FormulaC12 H22 O26 S5
Molecular Weight742.612
TypeSACCHARIDE

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESACDLabs12.01C(C1OC(C(OS(O)(=O)=O)C(C1OS(O)(=O)=O)OS(=O)(=O)O)OCC2C(C(C(C(O2)O)OS(O)(=O)=O)OS(=O)(O)=O)O)O
SMILESCACTVS3.385OC[CH]1O[CH](OC[CH]2O[CH](O)[CH](O[S](O)(=O)=O)[CH](O[S](O)(=O)=O)[CH]2O)[CH](O[S](O)(=O)=O)[CH](O[S](O)(=O)=O)[CH]1O[S ](O)(=O)=O
SMILESOpenEye OEToolkits2.0.7C(C1C(C(C(C(O1)OCC2C(C(C(C(O2)O)OS(=O)(=O)O)OS(=O)(=O)O)O)OS(=O)(=O)O)OS(=O)(=O)O)OS(=O)(=O)O)O
Canonical SMILESCACTVS3.385 OC[C@H]1O[C@@H](OC[C@@H]2O[C@@H](O)[C@@H](O[S](O)(=O)=O)[C@H](O[S](O)(=O)=O)[C@H]2O)[C@@H](O[S](O)(=O)=O)[C@H](O[S](O)( =O)=O)[C@@H]1O[S](O)(=O)=O
Canonical SMILESOpenEye OEToolkits2.0.7 C([C@@H]1[C@H]([C@H]([C@@H]([C@@H](O1)OC[C@H]2[C@@H]([C@H]([C@@H]([C@@H](O2)O)OS(=O)(=O)O)OS(=O)(=O)O)O)OS(=O)(=O)O)OS( =O)(=O)O)OS(=O)(=O)O)O
InChIInChI1.03 InChI=1S/C12H22O26S5/c13-1-3-6(34-39(16,17)18)8(36-41(22,23)24)10(38-43(28,29)30)12(33-3)31-2-4-5(14)7(35-40(19,20)21)9 (11(15)32-4)37-42(25,26)27/h3-15H,1-2H2,(H,16,17,18)(H,19,20,21)(H,22,23,24)(H,25,26,27)(H,28,29,30)/t3-,4+,5+,6-,7-,8-, 9+,10+,11-,12-/m1/s1
InChIKeyInChI1.03 SNMGREPYXWHBJB-FDEZJODUSA-N

Related Resource References

Resource NameReference
PubChem 129900327