PRD_002584

Lacto-N-biose I

Created:	2024-10-10
Last modified:	2025-07-02

PRD_002584 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 9H0O.

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1 entry where PRD_002584 is present

Chemical Details
Formal Charge	0
Atom Count	51
Chiral Atom Count	10
Bond Count	52
Aromatic Bond Count	0

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Chemical Component Summary
Name	Lacto-N-biose I
Systematic Name (OpenEye OEToolkits)	~{N}-[(2~{S},3~{R},4~{R},5~{S},6~{R})-6-(hydroxymethyl)-4-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-2,5-bis(oxidanyl)oxan-3-yl]ethanamide
Formula	C₁₄ H₂₅ N O₁₁
Molecular Weight	383.348
Type	SACCHARIDE

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	CACTVS	3.385	CC(=O)N[CH]1[CH](O)O[CH](CO)[CH](O)[CH]1O[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2O
SMILES	OpenEye OEToolkits	2.0.7	CC(=O)NC1C(C(C(OC1O)CO)O)OC2C(C(C(C(O2)CO)O)O)O
Canonical SMILES	CACTVS	3.385	CC(=O)N[C@H]1[C@@H](O)O[C@H](CO)[C@@H](O)[C@@H]1O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O)[C@H]2O
Canonical SMILES	OpenEye OEToolkits	2.0.7	CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@@H]1O)CO)O)O[C@@H]2[C@@H]([C@H]([C@H]([C@H](O2)CO)O)O)O

Related Resource References

Resource Name	Reference
PubChem	5288905
ChEBI	CHEBI:145593

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.