PRD_002583

Peptidoglycan disaccharide tetrapeptide

Created:2024-10-05
Last modified:  2024-10-16

PRD_002583 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 8PXY.

Chemical Details

Formal Charge0
Atom Count128
Chiral Atom Count16
Bond Count129
Aromatic Bond Count0
Toggle HydrogenToggle Labels

Chemical Component Summary

NamePeptidoglycan disaccharide tetrapeptide
Systematic Name (OpenEye OEToolkits)(2~{R})-2-[[(2~{S},6~{R})-2-[[(4~{R})-4-[[(2~{S})-2-[[(2~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{S})-5-acetamido-3-[(2~{R},3~{R},4~{R},5~{S},6~{R})-3-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-yl]oxy-2-(hydroxymethyl)-6-oxidanyl-oxan-4-yl]oxypropanoyl]amino]propanoyl]amino]-5-azanyl-5-oxidanylidene-pentanoyl]amino]-6,7-bis(azanyl)-7-oxidanylidene-heptanoyl]amino]propanoic acid
FormulaC37 H63 N9 O19
Molecular Weight937.945
TypePEPTIDE-LIKE

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESCACTVS3.385C[CH](NC(=O)[CH](CCC[CH](N)C(N)=O)NC(=O)CC[CH](NC(=O)[CH](C)NC(=O)[CH](C)O[CH]1[CH](NC(C)=O)[CH](O)O[CH](CO)[CH]1O[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2NC(C)=O)C(N)=O)C(O)=O
SMILESOpenEye OEToolkits2.0.7CC(C(=O)NC(CCC(=O)NC(CCCC(C(=O)N)N)C(=O)NC(C)C(=O)O)C(=O)N)NC(=O)C(C)OC1C(C(OC(C1OC2C(C(C(C(O2)CO)O)O)NC(=O)C)CO)O)NC(=O)C
Canonical SMILESCACTVS3.385 C[C@@H](NC(=O)[C@H](CCC[C@@H](N)C(N)=O)NC(=O)CC[C@@H](NC(=O)[C@H](C)NC(=O)[C@@H](C)O[C@@H]1[C@@H](NC(C)=O)[C@@H](O)O[C@H](CO)[C@H]1O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2NC(C)=O)C(N)=O)C(O)=O
Canonical SMILESOpenEye OEToolkits2.0.7 C[C@@H](C(=O)N[C@H](CCC(=O)N[C@@H](CCC[C@H](C(=O)N)N)C(=O)N[C@H](C)C(=O)O)C(=O)N)NC(=O)[C@@H](C)O[C@@H]1[C@H]([C@H](O[C@@H]([C@H]1O[C@@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)NC(=O)C)CO)O)NC(=O)C