PRD_002557

Stapled peptide

Created:	2024-02-27
Last modified:	2024-03-06

PRD_002557 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 6Q4Q.

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1 entry where PRD_002557 is present

Chemical Details
Formal Charge	0
Atom Count	228
Chiral Atom Count	7
Bond Count	236
Aromatic Bond Count	43

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Chemical Component Summary
Name	Stapled peptide
Formula	C₈₀ H₁₀₄ N₂₇ O₁₇
Molecular Weight	1,715.852
Type	PEPTIDE-LIKE

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	CACTVS	3.385	CC(C)C[CH]1NC(=O)[CH](CCCNC(N)=[NH2+])NC(=O)[CH](Cn2cc(nn2)c3cc(cc(c3)c4cn(C[CH](NC(=O)[CH](Cc5c[nH]c[nH+]5)NC(=O)[CH](Cc6c[nH]c7ccccc67)NC(=O)[CH](CCCC[NH3+])NC(=O)[CH](Cc8ccccc8)NC(=O)CNC(=O)[CH](Cc9ccc(O)cc9)NC1=O)C(=O)NCC(=O)NCC(N)=O)nn4)C(O)=O)NC(=O)CNC(C)=O
SMILES	OpenEye OEToolkits	2.0.7	CC(C)CC1C(=O)NC(C(=O)NCC(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(Cn2cc(nn2)-c3cc(cc(c3)C(=O)O)-c4cn(nn4)CC(C(=O)NC(C(=O)N1)CCCNC(=[NH2+])N)NC(=O)CNC(=O)C)C(=O)NCC(=O)NCC(=O)N)Cc5c[nH]c[nH+]5)Cc6c[nH]c7c6cccc7)CCCC[NH3+])Cc8ccccc8)Cc9ccc(cc9)O
Canonical SMILES	CACTVS	3.385	CC(C)C[C@@H]1NC(=O)[C@H](CCCNC(N)=[NH2+])NC(=O)[C@H](Cn2cc(nn2)c3cc(cc(c3)c4cn(C[C@H](NC(=O)[C@H](Cc5c[nH]c[nH+]5)NC(=O)[C@H](Cc6c[nH]c7ccccc67)NC(=O)[C@H](CCCC[NH3+])NC(=O)[C@H](Cc8ccccc8)NC(=O)CNC(=O)[C@H](Cc9ccc(O)cc9)NC1=O)C(=O)NCC(=O)NCC(N)=O)nn4)C(O)=O)NC(=O)CNC(C)=O
Canonical SMILES	OpenEye OEToolkits	2.0.7	CC(C)C[C@H]1C(=O)N[C@H](C(=O)NCC(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)NC(Cn2cc(nn2)-c3cc(cc(c3)C(=O)O)-c4cn(nn4)CC(C(=O)N[C@H](C(=O)N1)CCCNC(=[NH2+])N)NC(=O)CNC(=O)C)C(=O)NCC(=O)NCC(=O)N)Cc5c[nH]c[nH+]5)Cc6c[nH]c7c6cccc7)CCCC[NH3+])Cc8ccccc8)Cc9ccc(cc9)O

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.