PRD_002295

Duramycin

Created:2018-01-09
Last modified:  2020-08-12

PRD_002295 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 6C0Y.

Chemical Details

Formal Charge0
Atom Count271
Chiral Atom Count18
Bond Count276
Aromatic Bond Count18
Toggle HydrogenToggle Labels

Chemical Component Summary

NameDuramycin
Systematic Name (OpenEye OEToolkits)[(5~{S})-5-[[(2~{R})-2-[[(2~{S})-2-[2-[[(2~{S},3~{R})-2-[[(1~{S},4~{S},7~{S},16~{S},19~{S},22~{R},25~{S},29~{R},32~{S},35~{S})-25-[[(2~{S})-2-[[(2~{S})-6-azaniumyl-2-[[(2~{R})-2-azanyl-3-sulfanyl-propanoyl]amino]hexanoyl]amino]-5-azanyl-5-oxidanylidene-pentanoyl]amino]-19,38-dimethyl-3,6,12,15,18,21,24,31,34,37-decakis(oxidanylidene)-4,16,35-tris(phenylmethyl)-32-propan-2-yl-27,39-dithia-2,5,11,14,17,20,23,30,33,36-decazatricyclo[20.15.3.0^{7,11}]tetracontan-29-yl]carbonylamino]-3,4-bis(oxidanyl)-4-oxidanylidene-butanoyl]amino]ethanoylamino]-4-azanyl-4-oxidanylidene-butanoyl]amino]butanoyl]amino]-6-oxidanyl-6-oxidanylidene-hexyl]azanium
FormulaC89 H131 N23 O25 S3
Molecular Weight2,019.327
TypePEPTIDE-LIKE

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESCACTVS3.385CC[CH](NC(=O)[CH](CC(N)=O)NC(=O)CNC(=O)[CH](NC(=O)[CH]1CSC[CH](NC(=O)[CH](CCC(N)=O)NC(=O)[CH](CCCC[NH3+])NC(=O)[CH](N)CS)C(=O)N[CH]2CS[CH](C)[CH](NC(=O)[CH](Cc3ccccc3)NC(=O)[CH]4CCCN4C(=O)CNC(=O)[CH](Cc5ccccc5)NC(=O)[CH](C)NC2=O)C(=O)N[CH](Cc6ccccc6)C(=O)N[CH](C(C)C)C(=O)N1)[CH](O)C(O)=O)C(=O)N[CH](CCCC[NH3+])C(O)=O
SMILESOpenEye OEToolkits2.0.7CCC(C(=O)NC(CCCC[NH3+])C(=O)O)NC(=O)C(CC(=O)N)NC(=O)CNC(=O)C(C(C(=O)O)O)NC(=O)C1CSCC(C(=O)NC2CSC(C(C(=O)NC(C(=O)NC(C(=O)N1)C(C)C)Cc3ccccc3)NC(=O)C(NC(=O)C4CCCN4C(=O)CNC(=O)C(NC(=O)C(NC2=O)C)Cc5ccccc5)Cc6ccccc6)C)NC(=O)C(CCC(=O)N)NC(=O)C(CCCC[NH3+])NC(=O)C(CS)N
Canonical SMILESCACTVS3.385 CC[C@@H](NC(=O)[C@H](CC(N)=O)NC(=O)CNC(=O)[C@@H](NC(=O)[C@@H]1CSC[C@@H](NC(=O)[C@H](CCC(N)=O)NC(=O)[C@H](CCCC[NH3+])NC(=O)[C@@H](N)CS)C(=O)N[C@H]2CS[C@@H](C)[C@@H](NC(=O)[C@H](Cc3ccccc3)NC(=O)[C@@H]4CCCN4C(=O)CNC(=O)[C@H](Cc5ccccc5)NC(=O)[C@H](C)NC2=O)C(=O)N[C@@H](Cc6ccccc6)C(=O)N[C@@H](C(C)C)C(=O)N1)[C@@H](O)C(O)=O)C(=O)N[C@@H](CCCC[NH3+])C(O)=O
Canonical SMILESOpenEye OEToolkits2.0.7 CC[C@H](C(=O)N[C@@H](CCCC[NH3+])C(=O)O)NC(=O)[C@H](CC(=O)N)NC(=O)CNC(=O)[C@H]([C@H](C(=O)O)O)NC(=O)[C@@H]1CSC[C@H](C(=O)N[C@H]2CSC([C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N1)C(C)C)Cc3ccccc3)NC(=O)[C@@H](NC(=O)[C@@H]4CCCN4C(=O)CNC(=O)[C@@H](NC(=O)[C@@H](NC2=O)C)Cc5ccccc5)Cc6ccccc6)C)NC(=O)[C@H](CCC(=O)N)NC(=O)[C@H](CCCC[NH3+])NC(=O)[C@H](CS)N
InChIInChI1.06 InChI=1S/C89H129N23O25S3/c1-6-52(75(121)102-55(88(134)135)28-17-19-33-91)99-78(124)59(38-65(94)114)98-66(115)39-95-85(131)70(71(117)89(136)137)111-83(129)61-43-139-42-60(106-77(123)54(30-31-64(93)113)101-76(122)53(27-16-18-32-90)100-73(119)51(92)41-138)82(128)107-62-44-140-47(5)69(87(133)105-58(37-50-25-14-9-15-26-50)79(125)109-68(45(2)3)86(132)108-61)110-80(126)57(36-49-23-12-8-13-24-49)104-84(130)63-29-20-34-112(63)67(116)40-96-74(120)56(35-48-21-10-7-11-22-48)103-72(118)46(4)97-81(62)127/h7-15,21-26,45-47,51-63,68-71,117,138H,6,16-20,27-44,90-92H2,1-5H3,(H2,93,113)(H2,94,114)(H,95,131)(H,96,120)(H,97,127)(H,98,115)(H,99,124)(H,100,119)(H,101,122)(H,102,121)(H,103,118)(H,104,130)(H,105,133)(H,106,123)(H,107,128)(H,108,132)(H,109,125)(H,110,126)(H,111,129)(H,134,135)(H,136,137)/p+2/t46-,47-,51-,52+,53-,54-,55-,56-,57-,58-,59-,60+,61-,62-,63-,68-,69+,70-,71+/m0/s1
InChIKeyInChI1.06 VQHPEVWOXFKEGX-VWVMPJBBSA-P