PRD_002268

Lipid II

PRD_002268 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 6YFY.

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Chemical Component Summary

NameLipid II
Identifiers[(5~{S})-5-[[(4~{R})-4-[[(2~{S})-2-[2-[(2~{R},3~{R},4~{R},5~{S},6~{R})-3-acetamido-5-[(2~{S},3~{R},4~{R},5~{S},6~{R})-3-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-yl]oxy-2-[[[bis(oxidanidyl)-[[(2~{E},6~{E})-3,7,11-trimethyldodeca-2,6,10-trienyl]-$l^{3}-oxidanylidene]-$l^{5}-phosphanyl]-$l^{3}-oxidanylidene]-bis(oxidanidyl)-$l^{5}-phosphanyl]oxy-6-(hydroxymethyl)oxan-4-yl]oxypropanoylamino]propanoyl]amino]-5-oxidanyl-5-oxidanylidene-pentanoyl]amino]-6-oxidanylidene-6-[[(2~{R})-1-oxidanylidene-1-[[(2~{R})-1-oxidanyl-1-oxidanylidene-propan-2-yl]amino]propan-2-yl]amino]hexyl]azanium
FormulaC54 H91 N8 O26 P2
Molecular Weight1,330.286
TypePEPTIDE-LIKE
Isomeric SMILESC[C@H](C(=O)N[C@H](C)C(=O)O)NC(=O)[C@H](CCCC[NH3+])NC(=O)CC[C@H](C(=O)O)NC(=O)[C@H](C)NC(=O)C(C)O[C@@H]1[C@H]([C@H](O[C@@H]([C@H]1O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)NC(=O)C)CO)OP(=OP(=OC/C=C(\C)/CC/C=C(\C)/CCC=C(C)C)([O-])[O-])([O-])[O-])NC(=O)C
InChIInChI=1S/C54H90N8O26P2/c1-27(2)15-13-16-28(3)17-14-18-29(4)22-24-82-89(78,79)88-90(80,81)87-54-42(60-35(10)66)46(45(39(26-64)85-54)86-53-41(59-34(9)65)44(69)43(68)38(25-63)84-53)83-33(8)49(72)56-31(6)48(71)62-37(52(76)77)20-21-40(67)61-36(19-11-12-23-55)50(73)57-30(5)47(70)58-32(7)51(74)75/h15,17,22,30-33,36-39,41-46,53-54,63-64,68-69H,11-14,16,18-21,23-26,55H2,1-10H3,(H9-4,56,57,58,59,60,61,62,65,66,67,70,71,72,73,74,75,76,77,78,79,80,81)/q-4/p+1/b28-17+,29-22+/t30-,31+,32-,33-,36+,37-,38-,39-,41-,42-,43-,44-,45-,46-,53+,54-/m1/s1
InChIKeyFXVQKVNQHLOTIP-UTOAJUMUSA-O
CompositionPolymer Sequences: ALA-DGL-LYS-DAL-DAL
BIRD classGLYCAN COMPONENT
Represented AsPOLYMER
Compound Detailsn/a
Descriptionn/a

Chemical Details

Formal Charge0
Atom Count181
Chiral Atom Count16
Bond Count182
Aromatic Bond Count0