PRD_001136

Chromomycin A3, Monomer

Created:2013-07-26
Last modified:  2020-04-04

PRD_001136 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 4LAI.

Chemical Details

Formal Charge0
Atom Count165
Chiral Atom Count25
Bond Count172
Aromatic Bond Count11
Toggle HydrogenToggle Labels

Chemical Component Summary

NameChromomycin A3, Monomer
Systematic Name (OpenEye OEToolkits)[(2R,3S,4R)-6-[[(6S,7S)-6-[(2S,4R,5R,6R)-4-[(2S,4R,5R,6R)-4-[(2S,4S,5S,6S)-5-acetyloxy-4,6-dimethyl-4-oxidanyl-oxan-2-yl]oxy-6-methyl-5-oxidanyl-oxan-2-yl]oxy-6-methyl-5-oxidanyl-oxan-2-yl]oxy-7-[(1S,3S,4R)-1-methoxy-3,4-bis(oxidanyl)-2-oxidanylidene-pentyl]-3-methyl-4,10-bis(oxidanyl)-5-oxidanylidene-7,8-dihydro-6H-anthracen-2-yl]oxy]-4-[(2S,4R,5R,6R)-5-methoxy-6-methyl-4-oxidanyl-oxan-2-yl]oxy-2-methyl-oxan-3-yl] ethanoate
FormulaC57 H82 O26
Molecular Weight1,183.245
TypePEPTIDE-LIKE

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESACDLabs12.01O=C(OC1C(O)(C)CC(OC1C)OC2CC(OC(C)C2O)OC3CC(OC(C)C3O)OC8C(=O)c7c(cc6cc(OC5OC(C(OC(=O)C)C(OC4OC(C(OC)C(O)C4)C)C5)C)c(c(O)c6c7O)C)CC8C(OC)C(=O)C(O)C(O)C)C
SMILESCACTVS3.385CO[CH]1[CH](O)C[CH](O[CH]1C)O[CH]2C[CH](O[CH](C)[CH]2OC(C)=O)Oc3cc4cc5C[CH]([CH](OC)C(=O)[CH](O)[CH](C)O)[CH](O[CH]6C[CH](O[CH]7C[CH](O[CH]8C[C](C)(O)[CH](OC(C)=O)[CH](C)O8)[CH](O)[CH](C)O7)[CH](O)[CH](C)O6)C(=O)c5c(O)c4c(O)c3C
SMILESOpenEye OEToolkits1.7.6Cc1c(cc2cc3c(c(c2c1O)O)C(=O)C(C(C3)C(C(=O)C(C(C)O)O)OC)OC4CC(C(C(O4)C)O)OC5CC(C(C(O5)C)O)OC6CC(C(C(O6)C)OC(=O)C)(C)O)OC7CC(C(C(O7)C)OC(=O)C)OC8CC(C(C(O8)C)OC)O
Canonical SMILESCACTVS3.385 CO[C@@H]1[C@H](O)C[C@H](O[C@@H]1C)O[C@@H]2C[C@@H](O[C@H](C)[C@@H]2OC(C)=O)Oc3cc4cc5C[C@@H]([C@H](OC)C(=O)[C@@H](O)[C@@H](C)O)[C@H](O[C@H]6C[C@@H](O[C@H]7C[C@@H](O[C@H]8C[C@](C)(O)[C@@H](OC(C)=O)[C@H](C)O8)[C@H](O)[C@@H](C)O7)[C@H](O)[C@@H](C)O6)C(=O)c5c(O)c4c(O)c3C
Canonical SMILESOpenEye OEToolkits1.7.6 Cc1c(cc2cc3c(c(c2c1O)O)C(=O)[C@H]([C@@H](C3)[C@@H](C(=O)[C@H]([C@@H](C)O)O)OC)O[C@H]4C[C@H]([C@@H]([C@H](O4)C)O)O[C@H]5C[C@H]([C@@H]([C@H](O5)C)O)O[C@H]6C[C@]([C@H]([C@@H](O6)C)OC(=O)C)(C)O)OC7C[C@H]([C@H]([C@H](O7)C)OC(=O)C)O[C@H]8C[C@H]([C@H]([C@H](O8)C)OC)O
InChIInChI1.03 InChI=1S/C57H82O26/c1-21-34(79-40-19-37(53(26(6)75-40)77-28(8)59)82-38-16-33(61)52(70-11)25(5)74-38)15-31-13-30-14-32(54(71-12)51(68)46(63)22(2)58)55(50(67)44(30)49(66)43(31)45(21)62)83-41-18-35(47(64)24(4)73-41)80-39-17-36(48(65)23(3)72-39)81-42-20-57(10,69)56(27(7)76-42)78-29(9)60/h13,15,22-27,32-33,35-42,46-48,52-56,58,61-66,69H,14,16-20H2,1-12H3/t22?,23?,24?,25?,26?,27?,32?,33?,35?,36?,37?,38?,39?,40?,41?,42?,46?,47?,48?,52?,53?,54?,55?,56?,57-/m0/s1
InChIKeyInChI1.03 ZYVSOIYQKUDENJ-YFPVUNPNSA-N

Related Resource References

Resource NameReference
PubChem 656673
ChEMBL CHEMBL2303619
ChEBI CHEBI:34638