PRD_001124

Cyclomarin A

Created:2013-06-20
Last modified:  2013-09-18

PRD_001124 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 3WDC.

Chemical Details

Formal Charge0
Atom Count159
Chiral Atom Count12
Bond Count162
Aromatic Bond Count16
Toggle HydrogenToggle Labels

Chemical Component Summary

NameCyclomarin A
Systematic Name (OpenEye OEToolkits)(3S,6S,9S,12S,15S,18S,21S)-15-[(R)-methoxy(phenyl)methyl]-1,10,18-trimethyl-3-[(R)-[1-[(3R)-2-methyl-3-oxidanyl-butan-2-yl]indol-3-yl]-oxidanyl-methyl]-21-[(2R)-2-methyl-3-oxidanyl-propyl]-6-[(2R)-4-methylpent-3-en-2-yl]-9-(2-methylpropyl)-12-propan-2-yl-1,4,7,10,13,16,19-heptazacyclohenicosane-2,5,8,11,14,17,20-heptone
FormulaC56 H84 N8 O11
Molecular Weight1,045.313
TypePEPTIDE-LIKE

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESACDLabs12.01O=C1N(C)C(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)N(C)C(C(=O)NC(C(=O)NC1C(O)c3c2ccccc2n(c3)C(C)(C)C(O)C)C(/C=C(/C)C)C)CC(C)C)C(C)C)C(OC)c4ccccc4)C)CC(C)CO
SMILESCACTVS3.385CO[CH]([CH]1NC(=O)[CH](C)NC(=O)[CH](C[CH](C)CO)N(C)C(=O)[CH](NC(=O)[CH](NC(=O)[CH](CC(C)C)N(C)C(=O)[CH](NC1=O)C(C)C)[CH](C)C=C(C)C)[CH](O)c2cn(c3ccccc23)C(C)(C)[CH](C)O)c4ccccc4
SMILESOpenEye OEToolkits1.7.6CC1C(=O)NC(C(=O)NC(C(=O)N(C(C(=O)NC(C(=O)NC(C(=O)N(C(C(=O)N1)CC(C)CO)C)C(c2cn(c3c2cccc3)C(C)(C)C(C)O)O)C(C)C=C(C)C)CC(C)C)C)C(C)C)C(c4ccccc4)OC
Canonical SMILESCACTVS3.385 CO[C@@H]([C@@H]1NC(=O)[C@H](C)NC(=O)[C@H](C[C@@H](C)CO)N(C)C(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@H](CC(C)C)N(C)C(=O)[C@@H](NC1=O)C(C)C)[C@H](C)C=C(C)C)[C@H](O)c2cn(c3ccccc23)C(C)(C)[C@@H](C)O)c4ccccc4
Canonical SMILESOpenEye OEToolkits1.7.6 C[C@H]1C(=O)N[C@H](C(=O)N[C@H](C(=O)N([C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N([C@H](C(=O)N1)C[C@@H](C)CO)C)[C@@H](c2cn(c3c2cccc3)C(C)(C)[C@@H](C)O)O)[C@H](C)C=C(C)C)CC(C)C)C)C(C)C)[C@@H](c4ccccc4)OC
InChIInChI1.03 InChI=1S/C56H84N8O11/c1-30(2)25-34(8)44-52(71)60-45(47(67)39-28-64(56(11,12)36(10)66)40-24-20-19-23-38(39)40)55(74)63(14)42(27-33(7)29-65)50(69)57-35(9)49(68)61-46(48(75-15)37-21-17-16-18-22-37)53(72)58-43(32(5)6)54(73)62(13)41(26-31(3)4)51(70)59-44/h16-25,28,31-36,41-48,65-67H,26-27,29H2,1-15H3,(H,57,69)(H,58,72)(H,59,70)(H,60,71)(H,61,68)/t33-,34-,35?,36-,41+,42+,43+,44+,45+,46+,47+,48-/m1/s1
InChIKeyInChI1.03 MWSOAEPLDKLBNL-JFANDAKVSA-N

Related Resource References

Resource NameReference
PubChem 71710887