PRD_000154

MINI-GRAMICIDIN A DIMER

Created:2012-02-10
Last modified:  2023-09-20

PRD_000154 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 1KQE.

Chemical Details

Formal Charge0
Atom Count452
Chiral Atom Count22
Bond Count467
Aromatic Bond Count80
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Chemical Component Summary

NameMINI-GRAMICIDIN A DIMER
Systematic Name (OpenEye OEToolkits)N,N'-bis[(2S)-1-[[(2R)-1-[[(2S)-1-[[(2R)-1-[[(2S)-1-[[(2R)-1-[[(2S)-1-[[(2R)-1-[[(2S)-1-[[(2R)-1-[[(2S)-1-(2-hydroxyethylamino)-3-(1H-indol-3-yl)-1-oxidanylidene-propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]amino]-3-(1H-indol-3-yl)-1-oxidanylidene-propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]amino]-3-(1H-indol-3-yl)-1-oxidanylidene-propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]amino]-3-(1H-indol-3-yl)-1-oxidanylidene-propan-2-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]butanediamide
FormulaC168 H226 N32 O26
Molecular Weight3,109.791
TypePEPTIDE-LIKE

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESCACTVS3.370CC(C)C[CH](NC(=O)[CH](Cc1c[nH]c2ccccc12)NC(=O)[CH](CC(C)C)NC(=O)[CH](Cc3c[nH]c4ccccc34)NC(=O)[CH](CC(C)C)NC(=O)[CH](Cc5c[nH]c6ccccc56)NC(=O)[CH](NC(=O)[CH](NC(=O)[CH](NC(=O)[CH](C)NC(=O)CCC(=O)N[CH](C)C(=O)N[CH](C(C)C)C(=O)N[CH](C(C)C)C(=O)N[CH](C(C)C)C(=O)N[CH](Cc7c[nH]c8ccccc78)C(=O)N[CH](CC(C)C)C(=O)N[CH](Cc9c[nH]c%10ccccc9%10)C(=O)N[CH](CC(C)C)C(=O)N[CH](Cc%11c[nH]c%12ccccc%11%12)C(=O)N[CH](CC(C)C)C(=O)N[CH](Cc%13c[nH]c%14ccccc%13%14)C(=O)NCCO)C(C)C)C(C)C)C(C)C)C(=O)N[CH](Cc%15c[nH]c%16ccccc%15%16)C(=O)NCCO
SMILESOpenEye OEToolkits1.7.6CC(C)CC(C(=O)NC(Cc1c[nH]c2c1cccc2)C(=O)NCCO)NC(=O)C(Cc3c[nH]c4c3cccc4)NC(=O)C(CC(C)C)NC(=O)C(Cc5c[nH]c6c5cccc6)NC(=O)C(CC(C)C)NC(=O)C(Cc7c[nH]c8c7cccc8)NC(=O)C(C(C)C)NC(=O)C(C(C)C)NC(=O)C(C(C)C)NC(=O)C(C)NC(=O)CCC(=O)NC(C)C(=O)NC(C(C)C)C(=O)NC(C(C)C)C(=O)NC(C(C)C)C(=O)NC(Cc9c[nH]c1c9cccc1)C(=O)NC(CC(C)C)C(=O)NC(Cc1c[nH]c2c1cccc2)C(=O)NC(CC(C)C)C(=O)NC(Cc1c[nH]c2c1cccc2)C(=O)NC(CC(C)C)C(=O)NC(Cc1c[nH]c2c1cccc2)C(=O)NCCO
Canonical SMILESCACTVS3.370 CC(C)C[C@@H](NC(=O)[C@H](Cc1c[nH]c2ccccc12)NC(=O)[C@@H](CC(C)C)NC(=O)[C@H](Cc3c[nH]c4ccccc34)NC(=O)[C@@H](CC(C)C)NC(=O)[C@H](Cc5c[nH]c6ccccc56)NC(=O)[C@H](NC(=O)[C@@H](NC(=O)[C@H](NC(=O)[C@H](C)NC(=O)CCC(=O)N[C@@H](C)C(=O)N[C@H](C(C)C)C(=O)N[C@@H](C(C)C)C(=O)N[C@H](C(C)C)C(=O)N[C@@H](Cc7c[nH]c8ccccc78)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](Cc9c[nH]c%10ccccc9%10)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](Cc%11c[nH]c%12ccccc%11%12)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](Cc%13c[nH]c%14ccccc%13%14)C(=O)NCCO)C(C)C)C(C)C)C(C)C)C(=O)N[C@@H](Cc%15c[nH]c%16ccccc%15%16)C(=O)NCCO
Canonical SMILESOpenEye OEToolkits1.7.6 C[C@@H](C(=O)N[C@H](C(C)C)C(=O)N[C@@H](C(C)C)C(=O)N[C@H](C(C)C)C(=O)N[C@@H](Cc1c[nH]c2c1cccc2)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](Cc3c[nH]c4c3cccc4)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](Cc5c[nH]c6c5cccc6)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](Cc7c[nH]c8c7cccc8)C(=O)NCCO)NC(=O)CCC(=O)N[C@@H](C)C(=O)N[C@H](C(C)C)C(=O)N[C@@H](C(C)C)C(=O)N[C@H](C(C)C)C(=O)N[C@@H](Cc9c[nH]c1c9cccc1)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](Cc1c[nH]c2c1cccc2)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](Cc1c[nH]c2c1cccc2)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](Cc1c[nH]c2c1cccc2)C(=O)NCCO
InChIInChI1.03 InChI=1S/C168H226N32O26/c1-87(2)65-125(151(209)187-131(149(207)169-61-63-201)71-101-79-171-117-51-35-27-43-109(101)117)181-157(215)133(73-103-81-173-119-53-37-29-45-111(103)119)189-153(211)127(67-89(5)6)183-159(217)135(75-105-83-175-121-55-39-31-47-113(105)121)191-155(213)129(69-91(9)10)185-161(219)137(77-107-85-177-123-57-41-33-49-115(107)123)193-163(221)141(93(13)14)197-167(225)145(97(21)22)199-165(223)143(95(17)18)195-147(205)99(25)179-139(203)59-60-140(204)180-100(26)148(206)196-144(96(19)20)166(224)200-146(98(23)24)168(226)198-142(94(15)16)164(222)194-138(78-108-86-178-124-58-42-34-50-116(108)124)162(220)186-130(70-92(11)12)156(214)192-136(76-106-84-176-122-56-40-32-48-114(106)122)160(218)184-128(68-90(7)8)154(212)190-134(74-104-82-174-120-54-38-30-46-112(104)120)158(216)182-126(66-88(3)4)152(210)188-132(150(208)170-62-64-202)72-102-80-172-118-52-36-28-44-110(102)118/h27-58,79-100,125-138,141-146,171-178,201-202H,59-78H2,1-26H3,(H,169,207)(H,170,208)(H,179,203)(H,180,204)(H,181,215)(H,182,216)(H,183,217)(H,184,218)(H,185,219)(H,186,220)(H,187,209)(H,188,210)(H,189,211)(H,190,212)(H,191,213)(H,192,214)(H,193,221)(H,194,222)(H,195,205)(H,196,206)(H,197,225)(H,198,226)(H,199,223)(H,200,224)/t99-,100-,125+,126+,127+,128+,129+,130+,131-,132-,133-,134-,135-,136-,137-,138-,141+,142+,143+,144+,145-,146-/m0/s1
InChIKeyInChI1.03 RCIZXQWOQNOKQQ-FIEKVOBRSA-N