GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 9PVE designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 9PVE_GDP_C_201 | 98% | 27% | 0.05 | 0.979 | 1.16 | 1.66 | 4 | 5 | 0 | 0 | 100% | 1 |
| 9PVE_GDP_A_201 | 93% | 27% | 0.066 | 0.969 | 1.15 | 1.69 | 4 | 5 | 0 | 0 | 100% | 1 |
| 9PVE_GDP_B_201 | 91% | 26% | 0.07 | 0.962 | 1.15 | 1.71 | 4 | 6 | 0 | 0 | 100% | 1 |
| 9PVE_GDP_D_201 | 58% | 26% | 0.106 | 0.884 | 1.16 | 1.7 | 4 | 6 | 1 | 0 | 100% | 1 |
| 1PLL_GDP_A_167 | 100% | 9% | 0.027 | 0.993 | 2.72 | 1.67 | 1 | 9 | 4 | 0 | 100% | 1 |
| 8CNJ_GDP_A_201 | 100% | 66% | 0.029 | 0.993 | 0.62 | 0.53 | 1 | - | 0 | 0 | 100% | 1 |
| 5E95_GDP_A_201 | 100% | 30% | 0.033 | 0.99 | 1.19 | 1.52 | 5 | 5 | 0 | 0 | 100% | 1 |
| 8CNN_GDP_A_206 | 100% | 62% | 0.036 | 0.99 | 0.73 | 0.6 | 1 | - | 0 | 0 | 100% | 1 |
| 6MQT_GDP_F_201 | 100% | 85% | 0.037 | 0.991 | 0.36 | 0.32 | - | - | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 32% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 2CNW_GDP_A_1001 | 100% | 24% | 0.014 | 0.998 | 1.16 | 1.84 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 26% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
| 5V9L_GDP_A_201 | 100% | 35% | 0.014 | 0.998 | 1.01 | 1.42 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6EG8_GDP_K_401 | 100% | 25% | 0.015 | 0.999 | 1.16 | 1.76 | 3 | 7 | 0 | 0 | 100% | 1 |
