UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 7VZA designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 7VZA_UDP_B_401 | 98% | 29% | 0.046 | 0.977 | 1.21 | 1.51 | 3 | 7 | 0 | 0 | 100% | 1 |
| 7VZA_UDP_A_401 | 98% | 22% | 0.048 | 0.976 | 1.25 | 1.86 | 3 | 4 | 2 | 0 | 100% | 1 |
| 7VZA_UDP_E_401 | 98% | 18% | 0.048 | 0.976 | 1.53 | 1.92 | 3 | 11 | 0 | 0 | 100% | 1 |
| 7VZA_UDP_G_401 | 97% | 19% | 0.048 | 0.97 | 1.37 | 1.96 | 5 | 8 | 1 | 0 | 100% | 1 |
| 7VZA_UDP_D_401 | 96% | 23% | 0.052 | 0.972 | 1.29 | 1.74 | 3 | 6 | 0 | 0 | 100% | 1 |
| 7VZA_UDP_F_401 | 96% | 22% | 0.053 | 0.969 | 1.28 | 1.81 | 4 | 10 | 0 | 0 | 100% | 1 |
| 7VZA_UDP_H_401 | 93% | 27% | 0.059 | 0.958 | 1.06 | 1.75 | 2 | 6 | 0 | 0 | 100% | 1 |
| 7VZA_UDP_C_401 | 91% | 19% | 0.062 | 0.956 | 1.16 | 2.16 | 3 | 10 | 2 | 0 | 100% | 1 |
| 5F87_UDP_A_501 | 100% | 29% | 0.013 | 0.999 | 1.18 | 1.54 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |
