UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 7QIB designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 7QIB_UDP_A_405 | 79% | 77% | 0.083 | 0.932 | 0.39 | 0.43 | - | - | 0 | 0 | 100% | 1 |
| 7QIB_UDP_B_403 | 77% | 58% | 0.09 | 0.933 | 0.83 | 0.66 | 1 | 1 | 0 | 0 | 100% | 1 |
| 7QI9_UDP_B_401 | 84% | 68% | 0.089 | 0.956 | 0.46 | 0.62 | - | 1 | 0 | 0 | 100% | 1 |
| 7PDO_UDP_A_403 | 57% | 55% | 0.126 | 0.9 | 0.94 | 0.68 | 1 | 1 | 0 | 0 | 100% | 0.83 |
| 9GSR_UDP_B_1401 | 16% | 87% | 0.169 | 0.746 | 0.21 | 0.4 | - | - | 2 | 0 | 100% | 0.82 |
| 5F87_UDP_A_501 | 100% | 29% | 0.013 | 0.999 | 1.18 | 1.54 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |