UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 6JBR designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6JBR_UDP_O_501 | 88% | 31% | 0.076 | 0.957 | 1.03 | 1.62 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6JBR_UDP_B_501 | 87% | 31% | 0.077 | 0.953 | 1.03 | 1.6 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6JBR_UDP_A_501 | 86% | 31% | 0.079 | 0.951 | 1.01 | 1.62 | - | 6 | 0 | 0 | 100% | 1 |
| 6JBR_UDP_K_501 | 81% | 31% | 0.085 | 0.94 | 1.04 | 1.61 | 1 | 6 | 0 | 0 | 100% | 1 |
| 6JBR_UDP_M_501 | 64% | 31% | 0.109 | 0.909 | 1.01 | 1.61 | 1 | 6 | 0 | 0 | 100% | 1 |
| 6JBR_UDP_D_501 | 62% | 30% | 0.107 | 0.897 | 1.03 | 1.65 | 1 | 6 | 1 | 0 | 100% | 1 |
| 6JBR_UDP_F_501 | 59% | 28% | 0.112 | 0.893 | 1.07 | 1.68 | 2 | 7 | 2 | 0 | 100% | 1 |
| 6JBR_UDP_H_501 | 43% | 30% | 0.126 | 0.848 | 1.06 | 1.61 | 1 | 5 | 1 | 0 | 100% | 1 |
| 6JBW_UDP_B_900 | 87% | 34% | 0.07 | 0.946 | 1.03 | 1.45 | 2 | 5 | 0 | 0 | 100% | 1 |
| 5F87_UDP_C_501 | 100% | 26% | 0.015 | 0.999 | 1.25 | 1.62 | 4 | 7 | 0 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |
