UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 6BK2 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6BK2_UDP_A_501 | 98% | 35% | 0.06 | 0.983 | 1.37 | 1.31 | 5 | 4 | 0 | 0 | 100% | 1 |
| 6BK0_UDP_A_501 | 93% | 19% | 0.078 | 0.971 | 1.55 | 2.1 | 3 | 9 | 2 | 0 | 100% | 1 |
| 5TMB_UDP_A_501 | 77% | 47% | 0.137 | 0.978 | 1.05 | 1.01 | 1 | 1 | 0 | 0 | 100% | 1 |
| 6BK1_UDP_A_501 | 47% | 4% | 0.156 | 0.896 | 1.89 | 3.82 | 7 | 15 | 2 | 0 | 100% | 1 |
| 6BK3_UDP_A_501 | 43% | 30% | 0.179 | 0.904 | 1.14 | 1.75 | 2 | 9 | 0 | 0 | 100% | 1 |
| 5TME_UDP_A_501 | 36% | 19% | 0.184 | 0.875 | 1.87 | 1.76 | 6 | 6 | 0 | 0 | 100% | 1 |
| 4PHR_UDP_A_301 | 100% | 43% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 47% | 0.046 | 0.992 | 1.19 | 0.9 | 2 | 1 | 0 | 0 | 100% | 1 |
| 1GX4_UDP_A_401 | 100% | 20% | 0.046 | 0.991 | 2.39 | 1.19 | 4 | 3 | 0 | 0 | 100% | 1 |
| 5GY7_UDP_B_401 | 99% | 45% | 0.047 | 0.987 | 0.98 | 1.18 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3U2V_UDP_B_270 | 99% | 35% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
