Ligand validation:5YNU

8XL: 3-[(Z)-2-isocyanoethenyl]-1H-indole

8XL is a Ligand Of Interest in 5YNU designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5YNU_8XL_B_402	45%	33%	0.14	0.872	1.33	1.41	2	2	1	0	100%	1
5YNU_8XL_A_401	12%	45%	0.24	0.764	1.3	0.86	1	-	1	0	100%	1
5YNW_8XL_B_401	1%	38%	0.428	0.648	1.47	1.05	1	-	1	0	100%	1
5Z45_8XL_B_402	1%	42%	0.551	0.743	1.39	0.93	2	-	0	0	100%	0.85
5Z46_8XL_B_404	1%	49%	0.403	0.49	1.32	0.66	1	-	0	0	100%	0.81

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.