EF2: S-Thalidomide
EF2 is a Ligand Of Interest in 5YIZ designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5YIZ_EF2_S_501 | 98% | 12% | 0.03 | 0.989 | 2.13 | 1.96 | 4 | 12 | 0 | 0 | 100% | 1 |
| 5YIZ_EF2_J_501 | 97% | 12% | 0.035 | 0.986 | 2.15 | 1.87 | 4 | 12 | 0 | 0 | 100% | 1 |
| 5YIZ_EF2_h_501 | 97% | 12% | 0.035 | 0.986 | 2.15 | 1.93 | 4 | 10 | 0 | 0 | 100% | 1 |
| 5YIZ_EF2_b_501 | 95% | 11% | 0.04 | 0.984 | 2.13 | 2.01 | 4 | 11 | 0 | 0 | 100% | 1 |
| 5YIZ_EF2_t_501 | 95% | 13% | 0.042 | 0.984 | 2.11 | 1.87 | 4 | 12 | 0 | 0 | 100% | 1 |
| 5YIZ_EF2_A_501 | 94% | 12% | 0.044 | 0.986 | 2.15 | 1.85 | 4 | 11 | 0 | 0 | 100% | 1 |
| 5YIZ_EF2_q_501 | 94% | 11% | 0.043 | 0.982 | 2.13 | 2.02 | 5 | 12 | 0 | 0 | 100% | 1 |
| 5YIZ_EF2_n_501 | 93% | 12% | 0.044 | 0.979 | 2.15 | 1.92 | 4 | 10 | 0 | 0 | 100% | 1 |
| 5YIZ_EF2_P_501 | 93% | 11% | 0.045 | 0.98 | 2.16 | 2.02 | 6 | 11 | 0 | 0 | 100% | 1 |
| 5YIZ_EF2_V_501 | 92% | 12% | 0.044 | 0.977 | 2.12 | 1.9 | 4 | 11 | 0 | 0 | 100% | 1 |
| 5YIZ_EF2_k_501 | 92% | 12% | 0.045 | 0.976 | 2.11 | 1.94 | 4 | 11 | 0 | 0 | 100% | 1 |
| 5YIZ_EF2_G_501 | 90% | 12% | 0.052 | 0.979 | 2.14 | 1.86 | 4 | 12 | 0 | 0 | 100% | 1 |
| 5YIZ_EF2_e_501 | 89% | 12% | 0.05 | 0.973 | 2.15 | 1.94 | 4 | 12 | 0 | 0 | 100% | 1 |
| 5YIZ_EF2_Y_501 | 89% | 12% | 0.05 | 0.972 | 2.09 | 2.01 | 4 | 12 | 0 | 0 | 100% | 1 |
| 5YIZ_EF2_D_501 | 89% | 13% | 0.053 | 0.977 | 2.13 | 1.78 | 5 | 12 | 0 | 0 | 100% | 1 |
| 5YIZ_EF2_M_501 | 85% | 12% | 0.058 | 0.969 | 2.11 | 1.99 | 4 | 11 | 0 | 0 | 100% | 1 |
| 5YJ0_EF2_A_501 | 98% | 12% | 0.029 | 0.992 | 2.21 | 1.9 | 4 | 12 | 0 | 0 | 100% | 1 |
| 4TZC_EF2_B_505 | 80% | 2% | 0.061 | 0.956 | 3.7 | 3.05 | 5 | 14 | 0 | 0 | 100% | 1 |
| 7BQU_EF2_A_501 | 73% | 3% | 0.07 | 0.94 | 3.74 | 2.28 | 10 | 11 | 0 | 0 | 100% | 1 |
| 5AMI_EF2_B_151 | 90% | 4% | 0.049 | 0.974 | 2.57 | 3.08 | 6 | 15 | 0 | 0 | 100% | 1 |
| 5AMJ_EF2_B_151 | 88% | 6% | 0.055 | 0.977 | 2.83 | 2.2 | 6 | 11 | 0 | 0 | 100% | 1 |
| 5AMH_EF2_A_151 | 88% | 10% | 0.056 | 0.976 | 2.06 | 2.19 | 8 | 10 | 0 | 0 | 100% | 1 |
| 4V2Y_EF2_B_151 | 87% | 3% | 0.059 | 0.979 | 2.76 | 3.09 | 6 | 14 | 0 | 0 | 100% | 1 |














