Ligand validation:5Y4Q

S4M: 5'-[(S)-(3-AMINOPROPYL)(METHYL)-LAMBDA~4~-SULFANYL]-5'-DEOXYADENOSINE

S4M is a Ligand Of Interest in 5Y4Q designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5Y4Q_S4M_D_301	62%	42%	0.123	0.913	0.94	1.31	-	4	0	0	100%	1
5Y4Q_S4M_C_301	55%	52%	0.134	0.901	0.88	0.96	-	-	0	0	100%	1
5Y4Q_S4M_B_301	51%	47%	0.143	0.895	0.87	1.16	-	3	0	0	100%	1
5Y4Q_S4M_A_301	28%	42%	0.179	0.831	0.95	1.3	1	1	0	0	100%	1
4YUY_S4M_B_501	90%	27%	0.082	0.965	0.99	1.94	1	3	0	0	100%	1
4YUV_S4M_A_501	89%	23%	0.08	0.96	1.26	1.89	2	5	1	0	100%	1
4YUX_S4M_B_501	86%	23%	0.093	0.961	1.49	1.67	2	4	0	0	100%	1
5B1S_S4M_D_501	76%	25%	0.105	0.94	1.02	2.01	2	2	0	0	100%	1
4YV1_S4M_A_301	75%	36%	0.103	0.936	0.93	1.58	2	4	0	0	100%	1
6O65_S4M_G_401	78%	52%	0.105	0.948	0.67	1.16	1	4	0	0	100%	1
2PT6_S4M_C_503	78%	15%	0.106	0.948	1.35	2.36	3	4	1	0	100%	0.9792

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.