5VK2 | pdb_00005vk2


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

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NAG is a Ligand Of Interest in 5VK2 designated by the RCSB
Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5VK2_NAG_b_505 48% 74% 0.076 0.8340.36 0.53 - -10100%1
5VK2_NAG_B_509 38% 70% 0.065 0.7640.43 0.57 - -10100%1
5VK2_NAG_A_512 34% 71% 0.08 0.770.41 0.55 - -10100%1
5VK2_NAG_a_507 31% 76% 0.092 0.7710.34 0.51 - -00100%1
5VK2_NAG_B_508 28% 83% 0.07 0.7210.33 0.41 - -00100%1
5VK2_NAG_A_511 28% 82% 0.079 0.7340.3 0.45 - -00100%1
5VK2_NAG_C_506 17% 88% 0.087 0.6770.22 0.39 - -00100%1
5VK2_NAG_C_514 14% 71% 0.077 0.6370.39 0.57 - -00100%1
5VK2_NAG_c_507 11% 74% 0.105 0.6570.36 0.54 - -00100%1
5VK2_NAG_A_506 11% 83% 0.077 0.6040.32 0.42 - -00100%1
5VK2_NAG_B_505 9% 85% 0.092 0.610.32 0.37 - -00100%1
6P95_NAG_a_511 41% 62% 0.071 0.7920.51 0.74 - -20100%1
6P91_NAG_a_508 11% 79% 0.158 0.7420.35 0.45 - -10100%1
5OMI_NAG_A_503 7% 87% 0.109 0.6040.22 0.43 - -00100%1
7S8H_NAG_a_501 5% 50% 0.177 0.6860.42 1.36 - 220100%1
2QFR_NAG_B_451 100% 63% 0.013 0.9980.49 0.72 - 100100%1
5LDS_NAG_C_1003 100% 65% 0.016 0.9970.54 0.62 - -30100%1
7DDF_NAG_B_401 100% 84% 0.016 0.9960.21 0.49 - -00100%1
2HQM_NAG_A_1301 100% 61% 0.018 0.9960.59 0.7 - -00100%1
3THD_NAG_B_702 100% 48% 0.019 0.9950.71 1.18 - -00100%1