NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5VK2 designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5VK2_NAG_B_509 44% 75% 0.157 0.8840.42 0.55 - -10100%0.9333
5VK2_NAG_A_506 32% 87% 0.219 0.8950.31 0.39 - -00100%0.9333
5VK2_NAG_C_514 31% 76% 0.224 0.8930.37 0.55 - -00100%0.9333
5VK2_NAG_A_512 30% 76% 0.234 0.9010.39 0.53 - -10100%0.9333
5VK2_NAG_b_505 27% 80% 0.211 0.8570.33 0.51 - -00100%0.9333
5VK2_NAG_c_507 19% 78% 0.226 0.8230.36 0.53 - -00100%0.9333
5VK2_NAG_A_511 12% 86% 0.276 0.810.29 0.43 - -00100%0.9333
5VK2_NAG_B_508 11% 87% 0.278 0.7990.31 0.39 - -00100%0.9333
5VK2_NAG_a_507 9% 80% 0.302 0.790.34 0.49 - -00100%0.9333
5VK2_NAG_C_506 9% 90% 0.334 0.8210.23 0.37 - -00100%0.9333
5VK2_NAG_B_505 8% 88% 0.276 0.7480.31 0.35 - -00100%0.9333
6P91_NAG_a_508 4% 84% 0.387 0.760.33 0.43 - -00100%0.9333
1OC7_NAG_A_500 100% 60% 0.04 0.9910.61 0.9 - 100100%0.9333
1OC6_NAG_A_500 100% 67% 0.041 0.9880.46 0.8 - 100100%0.9333
1UWC_NAG_A_262 100% 54% 0.046 0.990.81 0.95 - -00100%0.9333
6ZE6_NAG_B_703 99% 52% 0.044 0.9840.78 1.07 - 200100%0.8667
6ZE2_NAG_B_704 99% 56% 0.042 0.9790.73 0.95 - 100100%0.9333