5VDO | pdb_00005vdo


1YC: 2-amino-9-[(1R,3R,6R,8R,9R,11S,14R,16R,17R,18R)-16-(6-amino-9H-purin-9-yl)-3,11,17,18-tetrahydroxy-3,11-dioxido-2,4,7,10,12,15-hexaoxa-3,11-diphosphatricyclo[12.2.1.1~6,9~]octadec-8-yl]-1,9-dihydro-6H-purin-6-one

1YC is a Ligand Of Interest in 5VDO designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5VDO_1YC_A_602 35% 9% 0.097 0.7832.24 2.2 18 22 60100%1
5VDO_1YC_B_602 22% 9% 0.103 0.7182.23 2.21 17 21 10100%1
4LOI_1YC_B_401 96% 21% 0.054 0.971.37 1.84 8 20 00100%0.5