UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 5U6N designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5U6N_UDP_A_504 | 82% | 7% | 0.128 | 0.984 | 3.61 | 1.27 | 8 | 1 | 0 | 0 | 100% | 1 |
| 5U6N_UDP_B_503 | 81% | 7% | 0.129 | 0.982 | 3.76 | 1.2 | 9 | 1 | 0 | 0 | 100% | 1 |
| 5V2J_UDP_B_503 | 86% | 10% | 0.112 | 0.981 | 3.03 | 1.36 | 12 | 6 | 0 | 0 | 100% | 1 |
| 5V2K_UDP_A_503 | 84% | 11% | 0.117 | 0.981 | 2.98 | 1.24 | 12 | 5 | 0 | 0 | 100% | 1 |
| 5U6M_UDP_A_502 | 71% | 7% | 0.15 | 0.971 | 3.74 | 1.2 | 10 | 3 | 0 | 0 | 100% | 1 |
| 5U6S_UDP_B_503 | 58% | 8% | 0.197 | 0.978 | 3.56 | 1.13 | 9 | 2 | 0 | 0 | 100% | 1 |
| 4PHR_UDP_A_301 | 100% | 42% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 46% | 0.046 | 0.992 | 1.19 | 0.9 | 2 | 1 | 0 | 0 | 100% | 1 |
| 1GX4_UDP_A_401 | 100% | 32% | 0.046 | 0.991 | 1.68 | 1.03 | 2 | 3 | 0 | 0 | 100% | 1 |
| 3U2V_UDP_B_270 | 99% | 33% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
| 5GY7_UDP_A_401 | 99% | 40% | 0.049 | 0.989 | 1.09 | 1.23 | 1 | 3 | 0 | 0 | 100% | 1 |
