GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 5SZY designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5SZY_GDP_D_200 | 97% | 30% | 0.054 | 0.975 | 1.07 | 1.61 | 2 | 7 | 0 | 0 | 100% | 1 |
| 5SZY_GDP_C_200 | 96% | 26% | 0.057 | 0.976 | 1.21 | 1.65 | 4 | 6 | 1 | 0 | 100% | 1 |
| 5SZY_GDP_B_201 | 93% | 25% | 0.062 | 0.962 | 1.17 | 1.74 | 4 | 9 | 1 | 0 | 100% | 1 |
| 5SZY_GDP_A_200 | 90% | 25% | 0.068 | 0.958 | 1.07 | 1.84 | 1 | 11 | 0 | 0 | 100% | 1 |
| 4IEN_GDP_A_202 | 99% | 26% | 0.039 | 0.988 | 1.37 | 1.54 | 5 | 10 | 0 | 0 | 100% | 1 |
| 5SZZ_GDP_B_202 | 98% | 20% | 0.05 | 0.98 | 1.19 | 2.07 | 3 | 10 | 2 | 0 | 100% | 1 |
| 5T02_GDP_D_200 | 98% | 27% | 0.054 | 0.982 | 1.12 | 1.73 | 3 | 7 | 0 | 0 | 100% | 1 |
| 5V3A_GDP_A_202 | 97% | 6% | 0.052 | 0.979 | 3.32 | 1.72 | 11 | 10 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 32% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 2CNW_GDP_A_1001 | 100% | 24% | 0.014 | 0.998 | 1.16 | 1.84 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 26% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
| 5V9L_GDP_A_201 | 100% | 35% | 0.014 | 0.998 | 1.01 | 1.42 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6EG8_GDP_K_401 | 100% | 25% | 0.015 | 0.999 | 1.16 | 1.76 | 3 | 7 | 0 | 0 | 100% | 1 |
