Ligand validation:5SVJ

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5SVJ designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5SVJ_NAG_A_403	24%	61%	0.258	0.886	0.74	0.72	1	1	0	0	100%	0.9333
5SVJ_NAG_A_402	10%	67%	0.368	0.882	0.2	1.04	-	1	0	0	100%	0.9333
5SVJ_NAG_A_401	7%	75%	0.3	0.764	0.31	0.65	-	1	0	0	100%	0.9333
5SVM_NAG_A_401	66%	84%	0.159	0.965	0.26	0.49	-	-	0	0	100%	0.9333
5SVL_NAG_A_402	64%	76%	0.177	0.976	0.22	0.7	-	1	2	0	100%	0.9333
5SVK_NAG_A_402	63%	78%	0.162	0.958	0.16	0.71	-	1	1	0	100%	0.9333
5SVR_NAG_A_401	61%	86%	0.132	0.921	0.24	0.48	-	-	0	0	100%	0.9333
5SVP_NAG_A_401	54%	83%	0.189	0.955	0.28	0.49	-	-	0	0	100%	0.9333
1OC7_NAG_A_500	100%	60%	0.04	0.991	0.61	0.9	-	1	0	0	100%	0.9333
1OC6_NAG_A_500	100%	67%	0.041	0.988	0.46	0.8	-	1	0	0	100%	0.9333
1UWC_NAG_A_262	100%	54%	0.046	0.99	0.81	0.95	-	-	0	0	100%	0.9333
6ZE6_NAG_B_703	99%	52%	0.044	0.984	0.78	1.07	-	2	0	0	100%	0.8667
6ZE2_NAG_B_704	99%	56%	0.042	0.979	0.73	0.95	-	1	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.